NNNNNNNNCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCCCCGAGGATACCTATTAAAGTGTCTGTATGTCACC
CATGTGAATAACAGATGAATTAATTATGACTGGTGCAATTACAAGGAATA
GTTAATGAAGCCATAATGACCAGATTCTGGCAGTTAATTTTCAAAGCACA
GTGAGAGGGAAATGTGGCAAAAGGTCCCCGAAGAAAACACGAAGCTCTGT
GTGCTCACCTTGGGGGCAGGGTCCTCCAGGGCGCCAGGCAATTGGGCCTG
TGAGGATCAGATCGCCTGCTTCAGTCAGTTGTTCTTTATGCTTCGGCTTC
GGTTGCTGACCAGGCTCGTTGGAAACCTAGGCCACTCATTTCCTTTGACC
ATCGTCCCCAAGGGCACCCGTGTCTTTGCTATTTTTAGGACATGACAAGA
TGGTGGAAACTGAAGAACTCGGTGATTATGCGATTTTTTTTTTTTTTTTA
GAGAGGACTGGGCACAGACTAAGGGGCATGCCTGGGCTTCTCGCACCCCC
GAGGCCTGGTTGCCTTTTCTCCTTTGGAAAGCGAGGAGAAAGCCCCAAAA
TTCCCCCAAAGGTGCAATTGGGCCTGCCTGGAATCCTTTCTATTTTCCAG
CCCGGGGAGGAAATTCTAGCGGGGGGTTGGTTTTTGTTGATATAAAAAAC
CATCAAACACATCATGAATTTAAATCATTCCCCCATCTCTGCCTTCGCTT
TATGTCTGTACTTTGCG

NNNNNAACGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGAAAATTATCTATAAA
TTCAATGCTGTGACATTCCCCATAGAACTAGAAAACACCATAACATTCAC
GTAGATGGACAGAAGACCTTAAATAACCAAATCAGCCTTGGCAGAGAGAA
CAATGCTGGAGGTGGCACGATCTCTGATCTCAAATGATATTCCTGAGCAT
AGCGATCATAAAACATCACAGAACATCATGGGGATGCATAAAATTGACCC
GGGGGCCAATGGAGTAGAAGAGAGGATTGAGAAAGAAGGCCAGCAGCCTC
AACCACTCAGTTTTTGACAAGGCAGTCCAAACCATTGGAGAAAGCACGGT
CTAGTTAACAATCGGTGCTGAGAAAACTAGATTTCCAAATGCAGAAGAAT
AANATGTAGTTCACAACTCCCATCCTTCATTAAAAAAAAAAATCCAGTAT
ACCAAAGACCTTGACGTAGTAAGCCCTGAAAAGTGGAAGCTTTCAGAGGC
AGCCCAAGGTAAAACGCTTTTGGATTTGCCAAAAATAAGTCTTTTATAAG
AACCCCAAAGCAAAAAAAAAACCCCCCAGGGTGGGAGAATTTGTAAAACT
TCCCTCCCTGGGAAAAAAAACGTCCTCTGGAGGAAAAAAAACCCCCAAAA
AAAAAAAAAATTTTGGCTTTGCGTCTCAAAAGGGGTGGAAATATACCCTT
ATAAAAACCGGGAGGGAG

Query= MSMg01no427_o19.b1 MSMg01no427_o19.b1 CHROMAT_FILE:
MSMg01no427_o19.b1 PHD_FILE: MSMg01no427_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:56 2005
         (413 letters)



>mm_chr14_49210020_49210833
          Length = 814

 Score =  756 bits (391), Expect = 0.0
 Identities = 406/413 (98%), Gaps = 5/413 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccccgagg---atacctattaaagtgtctgtatgtcacccatgtgaataacaga 60
           ||||||||||||||   ||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggaattccccgaggaaaat--ctattaaagtgtctgtatgtcacccatgtgaataacaga 557

                                                                       
Query: 61  tgaattaattatgactggtgcaattacaaggaatagttaatgaagccataatgaccagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgaattaattatgactggtgcaattacaaggaatagttaatgaagccataatgaccagat 497

                                                                       
Query: 121 tctggcagttaattttcaaagcacagtgagagggaaatgtggcaaaaggtccccgaagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctggcagttaattttcaaagcacagtgagagggaaatgtggcaaaaggtccccgaagaa 437

                                                                       
Query: 181 aacacgaagctctgtgtgctcaccttgggggcagggtcctccagggcgccaggcaattgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aacacgaagctctgtgtgctcaccttgggggcagggtcctccagggcgccaggcaattgg 377

                                                                       
Query: 241 gcctgtgaggatcagatcgcctgcttcagtcagttgttctttatgcttcggcttcggttg 300
           ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 376 gcctgtgaggatcagatcgcctgcttcagtcagttgttcttcaggcttcggcttcggttg 317

                                                                       
Query: 301 ctgaccaggctcgttggaaacctaggccactcatttcctttgaccatcgtccccaagggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctgaccaggctcgttggaaacctaggccactcatttcctttgaccatcgtccccaagggc 257

                                                                
Query: 361 acccgtgtctttgctatttttaggacatgacaagatggtggaaactgaagaac 413
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acccgtgtctttgctatttttaggacatgacaagatggtggaaactgaagaac 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 814
Length adjustment: 9
Effective length of query: 404
Effective length of database: 805
Effective search space:   325220
Effective search space used:   325220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)