Query= MSMg01no427_p24.b1 MSMg01no427_p24.b1 CHROMAT_FILE:
MSMg01no427_p24.b1 PHD_FILE: MSMg01no427_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:02 2005
(505 letters)
>mm_chr14_33984489_33985393
Length = 905
Score = 932 bits (482), Expect = 0.0
Identities = 497/502 (99%)
Strand = Plus / Minus
Query: 4 ggaattccagagcttttgcgaacaacctgaactacatccctccttgaaggcctgtgaagc 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ggaattccagagcttctgggaacaacctgaactacatccctccttgaaggcctgtgaagc 646
Query: 64 agattgtagggtcctggctctgccattctcttccagggtacatatgacacttggcttggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agattgtagggtcctggctctgccattctcttccagggtacatatgacacttggcttggg 586
Query: 124 tagaaactggcaattcttgttccctaaaggggtgtggggaagcaccaaggggttttatgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tagaaactggcaattcttgttccctaaaggggtgtggggaagcaccaaggggttttatgg 526
Query: 184 agtcatctgagaggtcaagtcctgaggtgacccgatccttgccttgttccacctgagacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agtcatctgagaggtcaagtcctgaggtgacccgatccttgccttgttccacctgagacc 466
Query: 244 ctagatgtgcagaaccccttatgcagcgcccctgggatcctcttgccttgcttccccact 303
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 465 ctagatgtgcagaaccccttatgcagcgcccctgggatcctcttaccttgcttccccact 406
Query: 304 ctgctctttggtaaggccatttgctccatcaacttctgatgtgtccctgatttatattta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctgctctttggtaaggccatttgctccatcaacttctgatgtgtccctgatttatattta 346
Query: 364 tatttatggtctggggggcagtattcccattacgggtgttgcccattttctttaatcctt 423
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 345 tatttatagtctggggggcagtattcccatttcgggtgttgcccattttctttaatcctt 286
Query: 424 acatccagccctgccttggtgaactctcagattcacttgtacatggctttgtgacatcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acatccagccctgccttggtgaactctcagattcacttgtacatggctttgtgacatcca 226
Query: 484 tccagaccagctccttgctggg 505
||||||||||||||||||||||
Sbjct: 225 tccagaccagctccttgctggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_p24.g1 MSMg01no427_p24.g1 CHROMAT_FILE:
MSMg01no427_p24.g1 PHD_FILE: MSMg01no427_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:02 2005
(441 letters)
>mm_chr14_33820804_33821643
Length = 840
Score = 748 bits (387), Expect = 0.0
Identities = 420/441 (95%), Gaps = 17/441 (3%)
Strand = Plus / Plus
Query: 1 tgggtgctgctgtgaagataagccccaactccctaggcccaggactgtcctcatcactct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tgggtgctgctgtgaagataagccccaactccctaggcccaggactgttctcatcactct 260
Query: 61 gcagtcacactaaccaaggcctgctagctcttctggctcccaaagtgtgagaggaatgtg 120
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 261 gcagtcacactaaccaaggcctgctagctcttctgggtccc-aagtgtgagaggaatgtg 319
Query: 121 accgccattttaaacactcattctgtttcctctctccaggcttctgctgcctctgacagc 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atagccattttaaacactcattctgtttcctctctccaggcttctgctgcctctgacagc 379
Query: 181 agcagcccctccctccccaggatggtctccttttgactaaggagactatatgtgagtcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agcagcccctccctccccaggatggtctccttttgactaaggagactatatgtgagtcag 439
Query: 241 tgaggtagcacatagacacacacacacacacacacacacacacacacacacacacacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgaggtagcacatagacacacacacacacacacacacacacacacacacacacaca---- 495
Query: 301 cacacacacacaggttgaggcatgcacacaacctggagtcggaaggctaattttcaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ------------ggttgaggcatgcacacaacctggagtcggaaggctaattttcaggac 543
Query: 361 agtagccagagaatgagaaagagaagtactgaatatccttcagtcccgtgcctctaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agtagccagagaatgagaaagagaagtactgaatatccttcagtcccgtgcctctaacat 603
Query: 421 ctgggaaactgagatctgaag 441
|||||||||||||||||||||
Sbjct: 604 ctgggaaactgagatctgaag 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 840
Length adjustment: 9
Effective length of query: 432
Effective length of database: 831
Effective search space: 358992
Effective search space used: 358992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
