Query= MSMg01no431_k20.b1 MSMg01no431_k20.b1 CHROMAT_FILE:
MSMg01no431_k20.b1 PHD_FILE: MSMg01no431_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:06 2005
(447 letters)
>mm_chr14_53621002_53621848
Length = 847
Score = 822 bits (425), Expect = 0.0
Identities = 439/447 (98%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 7 gaattcacttctttgtgcgctgattctgaaggcttgtgacagaagcaaagcctatttctc 66
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcacttctttgtgtgctgattctgaaggcttgtgacagaagcaaagcctatttctc 266
Query: 67 agtggctgaggtgactccagaggtagaattgtcactgagaaagaacaacatcctgagagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agtggctgaggtgactccagaggtagaattgtcactgagaaagaacaacatcctgagagt 326
Query: 127 tatagctgacctgctagtcaccacagtctcttctggattttaatttaattgggaagagca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tatagctgacctgctagtcaccacagtctcttctggattttaatttaattgggaagagca 386
Query: 187 atgaaaacatatgctcctacattattcatgtttctatggctgcagctggatggtgagtta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgaaaacatatgctcctacattattcatgtttctatggctgcagctggatggtgagtta 446
Query: 247 atatctgaaggccatagaacaatcagggggcatttctgatacacccagggggaaactcta 306
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 447 atatctgaaggccatagaacaatcagggggcatttctgagacacccagggggaaactcta 506
Query: 307 ttcaggtttattctagttactctagaaaaagagactcctggaaagggggtgacctcacag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttcaggtttattctagttactctagaaaaagagactcctggaaagggggtgacctcacag 566
Query: 367 cctttctccttttttttttttttt------gtcccatctttctgcatagggatgagccaa 420
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 567 cctttctcctttttttttttttttttttttgtcccatctttctgcatagggatgagccaa 626
Query: 421 ggtgagcaggtggagcagcttccttcc 447
|||||||||||||||||||||||||||
Sbjct: 627 ggtgagcaggtggagcagcttccttcc 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_k20.g1 MSMg01no431_k20.g1 CHROMAT_FILE:
MSMg01no431_k20.g1 PHD_FILE: MSMg01no431_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:06 2005
(413 letters)
>mm_chr14_54980884_54981696
Length = 813
Score = 793 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Minus
Query: 1 agagatctatccatctctgcctcccaagtgctggggttactaggattgtgccacaacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agagatctatccatctctgcctcccaagtgctggggttactaggattgtgccacaacctg 582
Query: 61 ctccacctttacttgggttccagggttggcactcggtttaccagggttgcaatagcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctccacctttacttgggttccagggttggcactcggtttaccagggttgcaatagcaaga 522
Query: 121 gcttttgtacagcagggtcattttgcctgccctacaaatttctcagcacttttaggcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gcttttgtacagcagggtcattttgcctgccctacaaatttctcagcacttttaggcatt 462
Query: 181 tcctcactgagttgcctgagatgagaatctacttctactccaaacaggttaatattagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcctcactgagttgcctgagatgagaatctacttctactccaaacaggttaatattagga 402
Query: 241 ggaacttaggaggagtgtgagaactctgctacacattcactgtctcccgcaaaacaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggaacttaggaggagtgtgagaactctgctacacattcactgtctcccgcaaaacaaaac 342
Query: 301 aaacaaaacaacacagaaccaaaagaaaggggccaagaagtcgtgctcctttcctcagcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaacaaaacaacacagaaccaaaagaaaggggccaagaagtcgtgctcctttcctcagcg 282
Query: 361 ggaacctcttacctgggcttctgcaaagagggtggcagatgtactgatgc 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggaacctcttacctgggcttctgcaaagagggtggcagatgtactgatgc 232
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
