Query= MSMg01no432_n23.b1 MSMg01no432_n23.b1 CHROMAT_FILE:
MSMg01no432_n23.b1 PHD_FILE: MSMg01no432_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:46 2005
(393 letters)
>mm_chr14_95879166_95879958
Length = 793
Score = 716 bits (370), Expect = 0.0
Identities = 385/392 (98%), Gaps = 5/392 (1%)
Strand = Plus / Plus
Query: 5 gaattctggagcaattcca---catttcctgggttctgcagtcatagaattgaaataagc 61
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctggagcaa--ccaaaacatttcctgggttctgcagtcatagaattgaaataagc 261
Query: 62 agaataacatataattgttcacctctgtggaaatggcaatgggatactcaacactcccct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agaataacatataattgttcacctctgtggaaatggcaatgggatactcaacactcccct 321
Query: 122 ctggaagaatagagtagagtcattcacctttcctagatgtgttagctactatccatcaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 ctggaagaatagagtagagtcattcacctttcctagatgtgttagctactatccaccaat 381
Query: 182 ggatatggtcttgggggctacaagagtataaaaggagtggggtattgagttcaatggaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggatatggtcttgggggctacaagagtataaaaggagtggggtattgagttcaatggaag 441
Query: 242 ctgcacctctagtgatgcagtttatgtgagttcttgctcctgacaaagtgagatttttcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgcacctctagtgatgcagtttatgtgagttcttgctcctgacaaagtgagatttttcc 501
Query: 302 aaagtcacacagcgacttgaaactcccccatggttctataagtaaacaaagtaataaatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaagtcacacagcgacttgaaactcccccatggttctataagtaaacaaagtaataaatg 561
Query: 362 cattggttattaatctgcacttgagtaaaatc 393
||||||||| ||||||||||||||||||||||
Sbjct: 562 cattggttactaatctgcacttgagtaaaatc 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_n23.g1 MSMg01no432_n23.g1 CHROMAT_FILE:
MSMg01no432_n23.g1 PHD_FILE: MSMg01no432_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:46 2005
(386 letters)
>mm_chr14_96050049_96050833
Length = 785
Score = 708 bits (366), Expect = 0.0
Identities = 381/386 (98%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 1 attcctatctcaatatgcttgaccacccatcaagttttccatgtccctttccagtagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 attcctatctcaatatgcttgaccacccatcaagttttccatgtccctttccagtagcct 526
Query: 61 ccatttctatcagaaatttggtggcctatttttttttcactattactgttacatacatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ccatttctatcagaaatttggtggcctatttttttttcactattactgttacatacatgt 466
Query: 121 atgtatacaaatatataaaccaaacccactgagtctgttttgttgtttatgtgtataaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgtatacaaatatataaaccaaacccactgagtctgttttgttgtttatgtgtataaaa 406
Query: 181 ttcaatggctgatcactttgtattatattactagggtctaatttttggggaagtcaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttcaatggctgatcactttgtattatattactagggtctaatttttggggaagtcaatta 346
Query: 241 tccttttggatgctgtgatatttttctactttctacattaaaatatttgctcatattgtt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tcctcttggatgctgtgatatttttctactttctacattaaaatatttgctcatattgtt 286
Query: 301 aatgtttaggcagccattaaaaggaggtatgatcttactatagacttcttgttggttggc 360
||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||
Sbjct: 285 aatgtttaggcagccattagaaggaggtatgatcttactgtagacttcttgttgtttggc 226
Query: 361 tcctatattgttttttataccctctt 386
||||||||||||||| ||||||||||
Sbjct: 225 tcctatattgttttt-ataccctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 785
Length adjustment: 9
Effective length of query: 377
Effective length of database: 776
Effective search space: 292552
Effective search space used: 292552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
