Query= MSMg01no434_a12.b1 MSMg01no434_a12.b1 CHROMAT_FILE:
MSMg01no434_a12.b1 PHD_FILE: MSMg01no434_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:18 2005
(435 letters)
>mm_chr14_29909032_29909865
Length = 834
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%), Gaps = 1/427 (0%)
Strand = Plus / Plus
Query: 7 gaattcattccctgttacaagagtcaggtttgatcattcccctgcctctggtctgctcta 66
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcattccctggcagaagagtcaggtttgatcattcccctgcctctggtctgctcta 266
Query: 67 gtttggaacacgtttgtgtcaggaacccatgcttaggcacacccaactcacttgtatgtg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtttggaacacgtttgtgtcaggaacccatgcttaggcacacccaactcacttgtatgtg 326
Query: 127 ctctgccactcaacaaccccacttgacagcttggggtgagtaatgcgctaagctctttag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctctgccactcaacaaccccacttgacagcttggggtgagtaatgcgctaagctctttag 386
Query: 187 actcaaatacatctttagactgaaatatttttgaaatatctgtggctttttcaatcagac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actcaaatacatctttagactgaaatatttttgaaatatctgtggctttttcaatcagac 446
Query: 247 attccagaagcttagagttataattgaaataagttgactcagttagttcagtcctttaca 306
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 447 attccagaagcttagagttataattgaaataagttgac-cagttagttcagtcctttaca 505
Query: 307 gacacagacacacacagacacacatagacacacacatacacacacacacacagagagaga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gacacagacacacacagacacacatagacacacacatacacacacacacacagagagaga 565
Query: 367 gagagagacagaaagagagagaggatcagagtcgtgtgtgtgtgtgtgtgtgtgtgtgtg 426
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gagagagacagagagagagagaggatcagagtcgtgtgtgtgtgtgtgtgtgtgtgtgtg 625
Query: 427 tgtgtgt 433
|||||||
Sbjct: 626 tgtgtgt 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 834
Length adjustment: 9
Effective length of query: 426
Effective length of database: 825
Effective search space: 351450
Effective search space used: 351450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_a12.g1 MSMg01no434_a12.g1 CHROMAT_FILE:
MSMg01no434_a12.g1 PHD_FILE: MSMg01no434_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:18 2005
(249 letters)
>mm_chr14_30103660_30104308
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 catgacattcatatgcacatacaatctctgttttatgaacttccccacgagggaacaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 catgacattcatatgcacatacaatctctgttttatgaacttccccacgagggaacaagt 390
Query: 61 gataaacttacatagcaccccaatatgatttagcacctcagtaaaataagatgatgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gataaacttacatagcaccccaatatgatttagcacctcagtaaaataagatgatgtgga 330
Query: 121 aggtctaagcagtcatctttctccattattttgaacactagctatttagtaaagagttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aggtctaagcagtcatctttctccattattttgaacactagctatttagtaaagagttgt 270
Query: 181 gtctgacatgtagtaattggcaatctttgagactataaaaacaggaagtgcagccagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtctgacatgtagtaattggcaatctttgagactataaaaacaggaagtgcagccagaag 210
Query: 241 agagaaaga 249
|||||||||
Sbjct: 209 agagaaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
