Query= MSMg01no434_g17.b1 MSMg01no434_g17.b1 CHROMAT_FILE:
MSMg01no434_g17.b1 PHD_FILE: MSMg01no434_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:50 2005
(508 letters)
>mm_chr14_75666832_75667739
Length = 908
Score = 870 bits (450), Expect = 0.0
Identities = 492/510 (96%), Gaps = 10/510 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaatcttctctcttggcctctgagggtaccaggcacacacatggtgtgggcatg 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatcttctcttttggcctctgagggtaccaggcacacacatggtgtgggcatg 263
Query: 64 catgcaggaaaaacattcctaaagataaaagaaaaataaagaaaatggttttaggtt-aa 122
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 264 catgcaggaaaaacattcctaaagataaaagaaaaataaagaaaacggttttaggttaaa 323
Query: 123 aaaaattatgattgattttggaaatgtttttgagagttctttttcattgataatttcatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaaattatgattgattttggaaatgtttttgagagttctttttcattgataatttcatg 383
Query: 183 cacttcataagagcctctcctccattcacactggtatttttagctggcttgaccttgaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacttcataagagcctctcctccattcacactggtatttttagctggcttgaccttgaga 443
Query: 243 cctccatctaaagacatcaaaggttgtcactgtgt----actttttggttattcttgctg 298
| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 444 gc-ccatctaaagacatcaaaggttgtcactgtgtacaaac----tggttattcttgctg 498
Query: 299 cacagagtcgacacttttaccatctctccatcctgtgtgtcaagtcagagcctctgcccc 358
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 499 cacagagtcaacacttttaccatctctccatcctgtgtgtcaggtcagagcctctgcccc 558
Query: 359 taacctaatggtatcagatatatgaaccagctggttatgtgttcatcctttggggactga 418
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 559 taacctaatggtatcagatatatgaatcagctggttatgtattcatcctttggggactga 618
Query: 419 aatgaagagatagtatgtgcattaaaagtgtactccatgggggaatctgagggagtttgt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatgaagagatagtatgtgcattaaaagtgtactccatgggggaatctgagggagtttgt 678
Query: 479 gtttctgaagtctctctctttcctgcagac 508
|||||||||||||||||||||||||||||
Sbjct: 679 atttctgaagtctctctctttcctgcagac 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_g17.g1 MSMg01no434_g17.g1 CHROMAT_FILE:
MSMg01no434_g17.g1 PHD_FILE: MSMg01no434_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:50 2005
(505 letters)
>mm_chr14_75882836_75883740
Length = 905
Score = 938 bits (485), Expect = 0.0
Identities = 500/505 (99%)
Strand = Plus / Minus
Query: 1 ctataggatgcagtcccagcttcagtattttgcctctgtgtgcatcttcctacacgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ctataggatgcagtcccagcttcagtattttgcctctgtgtgcatcttcctacacgatgg 646
Query: 61 taatagtgttctggcagattgagaaaccactgttagaaaggagaccatgtgctaaatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 taatagtgttctggcagattgagaaaccactgttagaaaggagaccatgtgctaaatgtc 586
Query: 121 tttgaagtccccagacacacaccacctggtacacgaagccctggagcatacttagaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttgaagtccccagacacacaccacctggtacacgaagccctggagcatacttagaaaac 526
Query: 181 tgtatgccagaatgggagaatctaggctaaaatttgattttacatttagtagagagagga 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgtatgccagaattggagaatctaggctaaaatttgattttacatttagtagagagagga 466
Query: 241 acctattctcttttagcctcagattcccccatttatgaacaaataaaataaataacaacc 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 acctattctcttcgagcctcagattcccccatttatgaacaaataaaataaataacaacc 406
Query: 301 agtcccttctctactctcttcagggctgtgctgagatgcgcgagagagcaaggtggtatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agtcccttctctactctcttcagggctgtgctgagatgcgcgagagagcaaggtggtatg 346
Query: 361 ctaatgcgctcacactagaggatgctgacaccgtgcaggggaaggaggcatgacagcatt 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 345 ctaatgcgctcacactagaggatgctgacaccatgcaggggaaggaggcatgacagcatt 286
Query: 421 atagggcttaatacatatttattgatcctcacgagctcttacctacccatcttttcctca 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atagggcttaatacatatgtattgatcctcacgagctcttacctacccatcttttcctca 226
Query: 481 cccttaaatatgagaccaggggaaa 505
|||||||||||||||||||||||||
Sbjct: 225 cccttaaatatgagaccaggggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
