Query= MSMg01no434_o17.b1 MSMg01no434_o17.b1 CHROMAT_FILE:
MSMg01no434_o17.b1 PHD_FILE: MSMg01no434_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:28 2005
(429 letters)
>mm_chr14_85326224_85327051
Length = 828
Score = 741 bits (383), Expect = 0.0
Identities = 415/433 (95%), Gaps = 15/433 (3%)
Strand = Plus / Plus
Query: 1 acagagaaaccatatatatatttttttttcctacaaaactctgaagttgttgttgttatt 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 203 acagagaaaccatatatata--tttttttcctacaaaactctgaagttgttgttgttatt 260
Query: 61 attattattgttatttgttaagtaacatttaagaaaaagtgtcatggcgcatgttatatg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 attattattgttatttgttaagtaacatttaagaaaaagtgtcatggcacatgttatatg 320
Query: 121 taactcaagcactctgaatctaagacaaaaggattaccagatgaaaattggccagtacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactcaagcactctgaatctaagacaaaaggattaccagatgaaaattggccagtacta 380
Query: 181 catagtaagttcaaggctactgcgtgcattgtagatattattacatttacctaattaaaa 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagtaaattcaaggctactgcgtgcattgtagatattattacatttacctaattaaaa 440
Query: 241 ttagaagtta------tttttttgatatgatgacttttaaatatagtacaatactacaaa 294
|||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagaagttagcagaat------gatatgatgacttttaaatatagtacaatactacaaa 494
Query: 295 gatatttttccccgtggttagtttttttgggaggaatttgtgtaacgtattttgattata 354
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 495 gatatttttccccgtggttagtttttt-gggaggaatttgtgtaacgtattttgattata 553
Query: 355 ttcatccccccaaacagctcttagatttatcccttcttccctatactgtcaattttgcac 414
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 554 ttcatccccccaaacagctcttagatttatcccttctcccctatactgtcaattttgcac 613
Query: 415 attaattatttac 427
|||||||||||||
Sbjct: 614 attaattatttac 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 828
Length adjustment: 9
Effective length of query: 420
Effective length of database: 819
Effective search space: 343980
Effective search space used: 343980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_o17.g1 MSMg01no434_o17.g1 CHROMAT_FILE:
MSMg01no434_o17.g1 PHD_FILE: MSMg01no434_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:28 2005
(569 letters)
>mm_chr14_85467174_85468142
Length = 969
Score = 1069 bits (553), Expect = 0.0
Identities = 565/573 (98%), Gaps = 8/573 (1%)
Strand = Plus / Minus
Query: 1 tcttattaggcttatgggatattcttttggaatactgtagtaatatgtccttgcatggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tcttattaggcttatgggatattcttttggaatactgtagtaatatgtccttgcatggtg 710
Query: 61 atagctgtttatttcttagaggtaatatcaaagcttttttaatataaatatgcaaatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 atagctgtttatttcttagaggtaatatcaaagcttttttaatataaatatgcaaatttt 650
Query: 121 ctcctgttgatttcaaatgaatgttcaatgtcatgtgtgtacatattaggaaaaattcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctcctgttgatttcaaatgaatgttcaatgtcatgtgtgtacatattaggaaaaattcca 590
Query: 181 agaatgttatttatcaaaaagaaaataatgatgagagaagagaggtggtgaggcttcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 agaatgttatttatcaaaaagaaaataatgatgagagaagagaggtggtgaggcttcaat 530
Query: 241 taagcttcat----cttttagtcacgaaatgaatcttccattttccttattatttctaac 296
|||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 taagcttcatcaaac----agtcacgaaatgaatcttccattttccttattatttctaac 474
Query: 297 cttctctccattaagaatgtactgtttggccccactggttacacaagaatgcaatccaaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cttctctccattaagaatgtactgtttggccccactggttacacaagaatgcaatccaaa 414
Query: 357 cagcatactataaaaccttttgaattgtggtgtatctcttaagaggtcagggtgatgttt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cagcatactataaaaccttttgaattgtggtgtatctcttaagaggtcagggtgatgttt 354
Query: 417 gaactataaaagcgatacaagccatcaaagcaacctggctttcacgggaatcacaggagg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaactataaaagcgatacaagccatcaaagcaacctggctttcacgggaatcacaggagg 294
Query: 477 aagaccacacatgtgctacctcctattttggccttttgctccatctttacacttttgatt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aagaccacacatgtgctacctcctattttggccttttgctccatctttacacttttgatt 234
Query: 537 tattctcaggtaagtgcccttattttccttcag 569
|||||||||||||||||||||||||||||||||
Sbjct: 233 tattctcaggtaagtgcccttattttccttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
