Query= MSMg01no435_g01.b1 MSMg01no435_g01.b1 CHROMAT_FILE:
MSMg01no435_g01.b1 PHD_FILE: MSMg01no435_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:05 2005
(324 letters)
>mm_chr14_118000182_118000904
Length = 723
Score = 559 bits (289), Expect = e-164
Identities = 309/317 (97%), Gaps = 5/317 (1%)
Strand = Plus / Plus
Query: 10 gaattcatgtata--tcctgaagatgtgggagtgatatcagttaaaactgtctctgttcg 67
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattcatgtagaggt--tgaagatgtgggagtgatatcagttaaaactgtctctgttcg 267
Query: 68 tactccccagaaaggcctcaccggacagcataaaccagcaggcagatcagcgaccagatc 127
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 268 tactccccagaaaggcctcaccagacagcataaaccagcaggcagatcagcgaccagatc 327
Query: 128 gatgtttctagaagctgggtgatggccaaagaatggagttaagaacttaggaagcccacc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gatgtttctagaagctgggtgatggccaaagaatggagttaagaacttaggaagcccacc 387
Query: 188 agaggaacatcatgtgtgtttaatgataggtgatggagaagaaactaccatttctgtaac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agaggaacatcatgtgtgtttaatgataggtgatggagaagaaactaccatttctgtaac 447
Query: 248 atcaatctgtgtgaatattgatgctgtggtccagttaaccataacatagctactgttaat 307
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 448 atcaatctgtgtgaatattgatgctgtggtccagc-aaccataacatagctactgttaat 506
Query: 308 aacaacagtatatgggc 324
|||||||||||||||||
Sbjct: 507 aacaacagtatatgggc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_g01.g1 MSMg01no435_g01.g1 CHROMAT_FILE:
MSMg01no435_g01.g1 PHD_FILE: MSMg01no435_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:05 2005
(469 letters)
>mm_chr14_118185772_118186637
Length = 866
Score = 818 bits (423), Expect = 0.0
Identities = 457/471 (97%), Gaps = 7/471 (1%)
Strand = Plus / Minus
Query: 1 accataaacaggggccccact-atgagccctgcatcg-taaatgtgcacaaccagtgtaa 58
||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 666 accataaacaggggccccactaatgagccctgcatcgataaatgtgcacaatcagtgtaa 607
Query: 59 tttgtagagttaggggcatttgaaagtacaagagctcacaaagaatgacccgaggctcta 118
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tctgtagagttaggggcatttgaaagtacaagagctcacaaagaatgacccgaggctcta 547
Query: 119 tgatcaaggaagctagtgattttcctaatgctcgcttcccgggaggtgctgaaagtggga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgatcaaggaagctagtgattttcctaatgctcgcttcccgggaggtgctgaaagtggga 487
Query: 179 ttattctctaggtctcatagagagttcccctttgatttcctatccactaagaaatgaagc 238
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 486 ttattctctaggtctcatagagagttctcctttgatttcctatccactaagaaacgaagc 427
Query: 239 ttgttctcacagccttcatctggggaccttctttgtaggctccccctcttgccttcgggg 298
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 426 ttgttctcacagccttcatctggggaccttctttgcaggctccccctcttgccttcgggg 367
Query: 299 ctctattagcttccgctttacccccccctgccttgagtcagcaaccgcccgccccctgcc 358
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 366 ctctattagcttccgctttacccc-----gccttgagtcagcaaccgcccgccccctgcc 312
Query: 359 accacacccagcctcccgctgggtagagtccaggttcttccagcctcctctaagcagtgg 418
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 311 accacacccagcctcccgctgggtggagtccaggttcttccagcctcctctaaacagtgg 252
Query: 419 cacctttctctgactcccttaagaccaggtacatctttgtatttactgatg 469
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cacctttctctgactcccttaagaccaggtacatctttgtatttactgatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 866
Length adjustment: 10
Effective length of query: 459
Effective length of database: 856
Effective search space: 392904
Effective search space used: 392904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
