Query= MSMg01no437_a10.b1 MSMg01no437_a10.b1 CHROMAT_FILE:
MSMg01no437_a10.b1 PHD_FILE: MSMg01no437_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:15 2005
(346 letters)
>mm_chr14_46365034_46365779
Length = 746
Score = 659 bits (341), Expect = 0.0
Identities = 344/345 (99%)
Strand = Plus / Plus
Query: 1 ttttatccagtattaaaaaaaaaaaaataagccgggcatagtggcacacgcctttaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttatccagtattaaaaaaaaaaaaataagccgggcatagtggcacacgcctttaatcc 260
Query: 61 cagcacttgggaggcagaggcaggtgaatttctgagttcgaggccagcctggtctacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcacttgggaggcagaggcaggtgaatttctgagttcgaggccagcctggtctacaga 320
Query: 121 gtgagtttcaggacagccaggactacacagagaaaccctgtctcaaaaaaaaaaaatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagtttcaggacagccaggactacacagagaaaccctgtctcaaaaaaaaaaaatcat 380
Query: 181 attaagcaaaactaagaaaaaagatgggtatgtccctccctcatccctgcggtggggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attaagcaaaactaagaaaaaagatgggtatgtccctccctcatccctgcggtggggagg 440
Query: 241 tccctgaggagggagtttgtgggacgtttttcttgctgctttacctgggaatagattacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccctgaggagggagtttgtgggacgtttttcttgctgctttacctgggaatagattacc 500
Query: 301 taactgaagacagctttcatttctcagacatttctgctgtaaatc 345
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 taactgaagacagttttcatttctcagacatttctgctgtaaatc 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_a10.g1 MSMg01no437_a10.g1 CHROMAT_FILE:
MSMg01no437_a10.g1 PHD_FILE: MSMg01no437_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:16 2005
(369 letters)
>mm_chr14_46543274_46544042
Length = 769
Score = 638 bits (330), Expect = 0.0
Identities = 342/350 (97%), Gaps = 8/350 (2%)
Strand = Plus / Minus
Query: 8 aattctctttgacaggggaagctttatgacgagtagccaacagcatgatgtcgggtccaa 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aattctctttgacaggggaagctttatgacgagtagccaacagcatgatgtcgggtccaa 494
Query: 68 gaggatctcggggatgaaggtggtgggaaaagggcaacctcctgccaccccttaacagcc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaggatctcggggatgaaggtggtgggaaaagggcaacctcctgccaccccttaacagcc 434
Query: 128 tttgctgaaccacagaaacagagccccgactcaccgtcctttggggaaagcgggtcctct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttgctgaaccacagaaacagagccccgactcaccgtcctttggggaaagcgggtcctct 374
Query: 188 tggttaacatgagagcatgttgcagctggcgtggtacttagctcaaaaacaccacttaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tggttaacatgagagcatgttgcagctggcgtggtacttagctcaaaaacaccacttaag 314
Query: 248 ggcacctctgcatt----cttttttagatgtggtcattggtatgagctgtgagctttcca 303
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggcacctctgcattcaaac----ttagatgtggtcattggtatgagctgtgagctttcca 258
Query: 304 gttgactggataaaagggaccatccaaatgtttttggtttttttgttttg 353
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gttgactggataaaagggaccatccaaatgtttttggtttttttgttttg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
