Query= MSMg01no437_a11.b1 MSMg01no437_a11.b1 CHROMAT_FILE:
MSMg01no437_a11.b1 PHD_FILE: MSMg01no437_a11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:16 2005
(350 letters)
>mm_chr14_69711711_69712464
Length = 754
Score = 632 bits (327), Expect = 0.0
Identities = 345/353 (97%), Gaps = 4/353 (1%)
Strand = Plus / Minus
Query: 2 aaaagtactgtgagaagtgtcctagattttaaattctggaactaagattaaagcttgtat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaaagtactgtgagaagtgtcctagattttaaattctggaactaagattaaagcttgtat 495
Query: 62 aatctcccccttcatttgtttggtttttattctttctcaattcaatcaccatttaaacga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatctcccccttcatttgtttggtttttattctttctcaattcaatcaccatttaaacga 435
Query: 122 agcagcttgaatgaggagtgggtgctctactcctttatgtatagggtacattttgaagat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agcagcttgaatgaggagtgggtgctctactcctttatgtatagggtacattttgaagat 375
Query: 182 ggtgttatttggagacaggatgttgctacagaatccacctggccctcaaattataactct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggtgttatttggagacaggatgttgctacagaatccacctggccctcaaattataactct 315
Query: 242 cctgactcattttct----tgctaggattatatgtaccaccagctgggcaattaaagaaa 297
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cctgactcagcctctcaagtgctaggattatatgtaccaccagctgggcaattaaagaaa 255
Query: 298 aagatttgctttatcatttttaattacatgcatgtgtgtttgtatgtgtacat 350
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 254 aagatttgctttatcatttttaattacatgtatgtgtgtttgtatgtgtacat 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 754
Length adjustment: 9
Effective length of query: 341
Effective length of database: 745
Effective search space: 254045
Effective search space used: 254045
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_a11.g1 MSMg01no437_a11.g1 CHROMAT_FILE:
MSMg01no437_a11.g1 PHD_FILE: MSMg01no437_a11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:16 2005
(410 letters)
>mm_chr14_69533846_69534652
Length = 807
Score = 708 bits (366), Expect = 0.0
Identities = 398/412 (96%), Gaps = 7/412 (1%)
Strand = Plus / Plus
Query: 1 atacccaaacaaaccagcacatgaaaaacctcaatgaagacatttggagac--gtactgt 58
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atacccaaacaaaccagcacatgaaaaacctcaatgaagacatttggagacatgtactgt 260
Query: 59 gtcagcaaatatgacctgaccattaaagtgttaagcaaggttctttcattaccaaaacaa 118
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcagcaaatatgacc-----attaaagtgttaagcaaggttctttcattaccaaaacaa 315
Query: 119 agaagtagatgggagaagattactcaggatccataaagttttgtagcattgagacaaaga 178
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 316 agaagtagatgggagaagattactcaggatccagaaagttttgtagcattgagacaaaga 375
Query: 179 aaagatccaataactatctaaaactgtaaaacaaatcttacacaaagatacagaagtcaa 238
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 376 aaagatccaataactatctaaaactgtaaaacaaatcttacacaaaggtacagaagtcaa 435
Query: 239 cacaacagccttctatacagcgatgatgttagatgttagagatattatctagagatagca 298
|| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 436 caaaacggccttctatacagcgatgatgttagatgttagagatattagctagagatagta 495
Query: 299 atagagtgaacccttccaaattctcagagagcattgacttcaactcccaattctttagtc 358
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 496 atagagtgaacccttccaaattctcagagagcattgacttcaactcctaattctttagtc 555
Query: 359 agacccatcatacaaagttgggcagtaagtttaactgaggcttccagaagac 410
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agacccatcatacaaagttgggcagtaagtttaactgaggcttccagaagac 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 807
Length adjustment: 9
Effective length of query: 401
Effective length of database: 798
Effective search space: 319998
Effective search space used: 319998
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
