XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CGTGTTTGTATGATTTTAGAGACTGGACCAAGAACTTAATCACTGAAAGA
TATTGTTTTAACTCAAAACAACCTGAAAACACATTTTTTCCAAGTTATAT
TCCATTTTCATTTCTTTGGAACATGAAACCAAATTCCTTCCTTAAATTAA
ATATTTAAAATATTGATTCCATATGCAGTTGTTAATTTAATGATTCTATT
TTATTTTTTATTTTGGAGGTTGAGCATATTAACACTGTAATTTGAATTCA
TAATAAAGGCCATGAGAATATAAATTCAGAAATGAATTTCATTTGTAGAA
CATATTATGAGAACAAGATGTCCAGGGTCATTTGTTTCATCAGGAAATCT
GTCAAGACAGAGCAAGCAATAATGGTGCTCGTAGATGTTACTAACATCAT
TGTGAAGTGTTTCCATGTTTACCTGACCAAAAGGAAAAATTCAAAACATA
AAGGAAATATTTAAAAATTAGATGGTGGGATCGATATCCCAAAATATGAG
CTCATGTTTCATTTGGTTTGTTTTCACATTGAAGTTTTGCTGGAACACTT
TCCCAAGAAATCATAAAAATATTTATTTATTCCTCCAAAAAAAAAAAAGG
ACCATGTTTGGAAAAATTACCCTTAACTGGACTTCTGGTAAACCCAAAAT
TTACAAAACTTATTCTTTTGTGTGTTCCAAAAATCGGAAATTAAATTTTA
TACGGGGAAGTTTTCTTTTG

TGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTGACCATAATTGAAAGTTAGAGATATGAAAC
ACTCAAAGTGAGACAAAATGAAATAATGATTGCTGTTATAAATAAGTGTT
GTATCTTAACAGAGTGGGAGAAATATGTTTAGTTTCATATTATGCACGGA
ACTGAGATAGTGTAGTAGCATGAGTGTGTAGAAGCATAATTCATCCAGAC
TAACAGATTCTCACTTCATAAGTGTTTAATGTTGTTACTACAATCCAATG
TATTTCTATAGGCTGCTATTTGGTATATATTTTTCCAACAAATTATACTT
ATTTTTTTAAAAAATTGCTAGCAATAACACATGTATTTCATGTATAATGC
ACATGCGTGCGAGCTGAATTTTTAAAATTTTCATTTATTGTAAATTTTGA
CTCACTGTTTTATAGACCTAGTCTAAATGACTTACCTTATGCTTAGAAGC
ATTATTCCTAGCCTCTTTACCCCTCTTGTTTTCACTTCACCGTTTCCTTT
GTTATTTTGTCCCTTCTCTATCCTTCTTTCCTTTCTTTTTATTTCCCGTA
CTTTTCTCTCTTTCCCCTCCTTTTTTTTCTTTTCCCCCCTCCTCCCTTCT
TATTTTGTTCTTTTCCCCCCTTATTTCTTCCCTTCTTCTTGTTCTCTTTT
CCCCTTTTCCCCTTTTATTTTCTTTCCTCTTTTTTACCCCCTCTCCCCTC
TGCTCCTCCTTCCTCTATTCTCCCTCCCAATCCTCCT

Query= MSMg01no438_h03.b1 MSMg01no438_h03.b1 CHROMAT_FILE:
MSMg01no438_h03.b1 PHD_FILE: MSMg01no438_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:13 2005
         (473 letters)



>mm_chr14_111411466_111412333
          Length = 868

 Score =  803 bits (415), Expect = 0.0
 Identities = 454/469 (96%), Gaps = 6/469 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcgtgtttgtatgattttagagactggaccaagaacttaatcactgaaagatattg 64
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 836 gaattcgtgtttgtatgattttagagactggaccaagagcttaatcactgaaagatattg 777

                                                                       
Query: 65  ttttaactcaaaacaacctgaaaacacattttttccaagttatattccattttcatttct 124
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 776 ttttaactcaaaacaacctgaaaacaca-tttttccaagttatattccattttcatttct 718

                                                                       
Query: 125 ttggaacatgaaaccaaattccttccttaaattaaatatttaaaatattgattccatatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 717 ttggaacatgaaaccaaattccttccttaaattaaatatttaaaatattgattccctatg 658

                                                                       
Query: 185 cagttgttaatttaatgattctattttattttttattttggaggttgagcatattaacac 244
           ||||| |||| ||||||||||||||   |||||||||||||| |||||||||||||||||
Sbjct: 657 cagttcttaaattaatgattctatt---ttttttattttggatgttgagcatattaacac 601

                                                                       
Query: 245 tgtaatttgaattcataataaaggccatgagaatataaattcagaaatgaatttcatttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tgtaatttgaattcataataaaggccatgagaatataaattcagaaatgaatttcatttg 541

                                                                       
Query: 305 tagaacatattatgagaacaagatgtccagggtcatttgtttcatcaggaaatctgtcaa 364
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 540 tagaacatattatgagaacaagatgtccagggtcatttatttcatcaggaaatctgtcaa 481

                                                                       
Query: 365 gacagagcaagcaataatggtgctcgtagatgttactaacatcattgtgaagtgtttcca 424
           ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 480 gacagagcaagcaataatggtgctcgtagatgttactaacatcgttgtcaagtgtttcca 421

                                                            
Query: 425 tgtttacctgaccaaaaggaaaaattcaaaacataaaggaaatatttaa 473
           |||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 420 tgtttacctgaccaat--gaaaaattcaaaacataaaggaaatatttaa 374


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 868
Length adjustment: 10
Effective length of query: 463
Effective length of database: 858
Effective search space:   397254
Effective search space used:   397254
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)