Query= MSMg01no439_g15.b1 MSMg01no439_g15.b1 CHROMAT_FILE:
MSMg01no439_g15.b1 PHD_FILE: MSMg01no439_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:32 2005
(490 letters)
>mm_chr14_124001870_124002759
Length = 890
Score = 919 bits (475), Expect = 0.0
Identities = 484/487 (99%)
Strand = Plus / Minus
Query: 4 ggaattcacacccattactctcttctgtctctgtggaaaagtgataggggctagatttct 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggaattcacacccatcaatctcttctgtctctgtggaaaagtgataggggctagatttct 631
Query: 64 ctaaaattctttgtctgatatttgaatgccttcatagaatcactttcttcctcctttgtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ctaaaattctttgtctgatatttgaatgccttcatagaatcactttcttcctcctttgtc 571
Query: 124 tttttaaaggatttaaaaaatatttttgcaaccactgtctgaataagtaggagcctgtca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttttaaaggatttaaaaaatatttttgcaaccactgtctgaataagtaggagcctgtca 511
Query: 184 tttaagagacatctcaagttaaggctaccagatgtcacctacccccacctcacagtaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttaagagacatctcaagttaaggctaccagatgtcacctacccccacctcacagtaaat 451
Query: 244 cagagaataagtgtcatttgaatattttgcatatatttccgtgggatgtcaagagtccct 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 450 cagagaataagtgtcatttgaatattttgcatacatttccgtgggatgtcaagagtccct 391
Query: 304 aactcaaattatgtaaaataaaagtaattagtgaaacctactgcaaaatccatctctaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aactcaaattatgtaaaataaaagtaattagtgaaacctactgcaaaatccatctctaaa 331
Query: 364 ttaagttttcaaagtaacaacagcttggaactacctaggcacactttaaagacaagtagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttaagttttcaaagtaacaacagcttggaactacctaggcacactttaaagacaagtagc 271
Query: 424 ttgatttcctctgggaatgggagggttggggaaagtcagcttctcagatggatggagaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgatttcctctgggaatgggagggttggggaaagtcagcttctcagatggatggagaaa 211
Query: 484 catataa 490
|||||||
Sbjct: 210 catataa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_g15.g1 MSMg01no439_g15.g1 CHROMAT_FILE:
MSMg01no439_g15.g1 PHD_FILE: MSMg01no439_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:32 2005
(451 letters)
>mm_chr14_123791665_123792515
Length = 851
Score = 810 bits (419), Expect = 0.0
Identities = 443/455 (97%), Gaps = 8/455 (1%)
Strand = Plus / Plus
Query: 1 aactagagtcaatatagtttagatctttagaaatataggcttttggtccaaactacatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactagagtcaatatagtttagatctttagaaatataggcttttggtccaaactacatcg 260
Query: 61 tttccattcttagatttaaaatttgtttattgtttaaccttcagccttttatgttccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccattcttagatttaaaatttgtttattgtttaaccttcagccttttatgttccatt 320
Query: 121 ccctcatctgttagatggatataatagtatctgtactgaagcagcagaattaaggaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctcatctgttagatggatataatagtatctgtactgaagcagcagaattaaggaatgt 380
Query: 181 gtaatttgaaatgttaggaaagtaatcttttaacatatcttttctattctactctatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaatttgaaatgttaggaaagtaatcttttaacatatcttttctattctactctatctg 440
Query: 241 gtgt----tttttattttctgcaaatgatgcaacctcaaaggctaagatcactggaaaaa 296
| || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtaaaat----attttctgcaaatgatgcaacctcaaaggctaagatcactggaaaaa 496
Query: 297 ggaaaaacaatgaatattttaaaatgatacaatgttttaaaaagctacatttatttataa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggaaaaacaatgaatattttaaaatgatacaatgttttaaaaagctacatttatttataa 556
Query: 357 ctgtataattttgtgtgtgtctgtgcatgcatgtgtgtgcttatgtatgcatgtgcgcac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 557 ctgtataattttgtgtgtgtctgtgcatgcatgtgtgtgcttatgtatgcatgtgtgtac 616
Query: 417 atatctttttgagtttatgtatcacatatttgcaa 451
||||||||| |||||||||||||||||||||||||
Sbjct: 617 atatcttttcgagtttatgtatcacatatttgcaa 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
