CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGATCCGCGGAAT
CAAATCCTCTGCCAGATAGCAAGTGCTGCTCTTAAAAGCAGATCCATCTC
CAGTTGTGAGAACTCGCTGTTTTCCAATTGTAGTCCTCATCCAAAGAGCA
TTTGTCTATGCTTTTGGTGGGCAATGTGTAGCTTTCCCCTAGTAGACTTC
TACTGAGCATGCTCCTGAAAAGCCTCGCTGTCCCACTGGTTGGAGTAGAG
TGCTCTAGAGGCATTTCTGGCGACTATTTCAGGAAGCCAAGTAGAGGCGA
GTAGAGAACCTGTCTGTTTGACTTAGAGCCATAAGCATCTTCTCTGTCAC
TTAGGATACTGGTCCTTATGCAGGATGGGTTGCATGGAATGCTTGCCTGT
GATGTGCTGAGTACAGGCCTCCCAAGGAGTAAGTCTCCCATGCATGGCAG
CTATTACCATGCTACTGGGAAGTGGATGGGCAAACCCTTTGTATCTGTTC
CACAGTGTGAGCCTTTTTCTAAACACTCTGCCTCTTCCATTTACTTATCA
GAAATACCATCTACCTGAATGCACTTGCTCTCTTTGAGCCCAGCCTATTT
TTTGACCCCGATGTGCTTTCGACTTTGCTAACCTTTTCCACTTGTCATAT
TCCCAATCTCTTTTCTTCCATTGGTTCCTCTATATTTTTGTGTCTTGGGC
ACCACCTATTCCTTTTCTTCCTTAAAGGTTATCTGCCCGGCTGTCTACTT
CCCTTCCCTTTCN

ATGAAGTGGTAGCCTGGCGCCGCCTGCTCTTCGAATTAGGTGACCTATAA
AAGATCCGCGAATCTCATCAGTGAGTAGATTTTCTAAAGAGAAAAAGATT
CCTAGAAAAAGACAAGTTCCCAAAAAGGAAACGAAAAAACCCTCAGAAGG
GGCGGAAGAATGGAAAACCGTTAGCAGCCCTTTTGAACTGGAAGCTCACC
AGGGCACCATTGGCCTTTTCTCCTTTAATAATAAAACTGGCTTTTTTTTA
AAGGTTCCAAAAACACCCTTCATACTTTATAAGCTTTAAAGAAAGGGAAA
CACTAGTCTTTGTTGACTTTTGCTCATGCCTCAAATTCAATTTTAAAGAG
ATATCATCAGGGGGTTTAAGAGGCCCCGGGCTGTACTTAAAACCATAGTA
AACTGACCCATGTCTCCCTAATTCCCCCTGTGAGAATGTTTGCAGCAGAT
TTACTAATTGCACACTGGTGTCAATAACTCTAACGAGATAAATTCTTGTT
GCTTCCCGATTCGATCTTCAGCCCATACCGCTTCCCCCTTACCCGTATCC
GCTCCCTTTCCCTTTTCTTCTTACACTTCTTTTCCTTCTCTCGCCCTTTT
TTTCGTCTTTCCCCTCCTTTTCTTCCTATCTATTCTCCCTTCCCTTTTAT
TTGTCCCCTCTTCTTTTTCCTCTCTCTTATTCCTCTTCCATTTTTTCTCT
TACTCACTTTTCTTTGTCCTCCTTCTATCCTTTCTTCTTCACTTAAC

Query= MSMg01no439_i18.b1 MSMg01no439_i18.b1 CHROMAT_FILE:
MSMg01no439_i18.b1 PHD_FILE: MSMg01no439_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:42 2005
         (452 letters)



>mm_chr14_30481773_30482624
          Length = 852

 Score =  822 bits (425), Expect = 0.0
 Identities = 446/453 (98%), Gaps = 2/453 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagcaagtgctgctcttaaaagcagatccatctccagttgtgagaactcgctgttttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tagcaagtgctgctcttaaaagcagatccatctccagttgtgagaactcgctgttttcca 593

                                                                       
Query: 61  attgtagtcctcatccaaagagcatttgtctatgcttttggtgggcaatgtgtagctttc 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 592 attgtagtcctcatccaaagagcatttgtctatgcttttgatgggcaatgtgtagctttc 533

                                                                       
Query: 121 ccctagtagacttctactgagcatgctcctgaaaagcctcgctgtcccactggttggagt 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 532 ccctagtagacttctactgagcatgctcctgaaaagccttgctgtcccactggttggagt 473

                                                                       
Query: 181 agagtgctctagaggcatttctggcgactatttcaggaagccaagtagaggcgagtagag 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 472 agagtgctctagaggcatttctggcgactatttcaggaagccaagtagagccgagtagag 413

                                                                       
Query: 241 aacctgtctgtttgacttagagccataagcatcttctctgtcacttaggatactggtcct 300
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aacctgtctgggtgacttagagccataagcatcttctctgtcacttaggatactggtcct 353

                                                                       
Query: 301 tatgcaggatgggttgcatgga-atgcttgcctgtgatgtgctgagtacaggcctcccaa 359
           ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 352 tatgcaggatgggttgcat-gagatgcttgcctgtgatgtgctgagtacaggcctcccaa 294

                                                                       
Query: 360 ggagtaagtctcccatgcatggcagctattaccatgctactgggaagtggatgggcaaac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggagtaagtctcccatgcatggcagctattaccatgctactgggaagtggatgggcaaac 234

                                            
Query: 420 cctttgtatctgttccacagtgtgagccttttt 452
           |||||||||||||||||||||||||||||||||
Sbjct: 233 cctttgtatctgttccacagtgtgagccttttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)