Query= MSMg01no439_n11.b1 MSMg01no439_n11.b1 CHROMAT_FILE:
MSMg01no439_n11.b1 PHD_FILE: MSMg01no439_n11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:04 2005
(472 letters)
>mm_chr14_30103630_30104500
Length = 871
Score = 853 bits (441), Expect = 0.0
Identities = 459/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Minus
Query: 1 cacatacaatctctgttttatgaacttccccacgagggaacaagtgataaacttacatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cacatacaatctctgttttatgaacttccccacgagggaacaagtgataaacttacatag 405
Query: 61 caccccaatatgatttagcacctcagtaaaataagatgatgtggaaggtctaagcagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 caccccaatatgatttagcacctcagtaaaataagatgatgtggaaggtctaagcagtca 345
Query: 121 tctttctccattattttgaacactagctatttagtaaagagttgtgtctgacatgtagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctttctccattattttgaacactagctatttagtaaagagttgtgtctgacatgtagta 285
Query: 181 attggcaatctttgagactataaaaacaggaagtgcagccagaagagagaaagatcgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 attggcaatctttgagactataaaaacaggaagtgcagccagaagagagaaagatcgtaa 225
Query: 241 gagtggattttgtattcccataaaacagtagttctcaggcctaactgagccccagcccta 300
||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 224 gagtggaacatg-attcccataaaacagtagttctcagacctaactaagccccagcccta 166
Query: 301 cctgaagggctgcttcctatacatggcccaacctggggcttctgactcactatgtgggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cctgaagggctgcttcctatacatggcccaacctggggcttctgactcactatgtgggtg 106
Query: 361 gggcctgagagtaaagacaccaaataggtcactgaatgaagtcgacgacattgatggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gggcctgagagtaaagacaccaaataggtcactgaatgaagtcgacgacattgatggaaa 46
Query: 421 ccccacacataagagatagctcaagaatcagggtcttcaccactc 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 ccccacacataagagatagctcaagaatcagggtcttcaccactc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 871
Length adjustment: 10
Effective length of query: 462
Effective length of database: 861
Effective search space: 397782
Effective search space used: 397782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_n11.g1 MSMg01no439_n11.g1 CHROMAT_FILE:
MSMg01no439_n11.g1 PHD_FILE: MSMg01no439_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:04 2005
(402 letters)
>mm_chr14_29935701_29936502
Length = 802
Score = 739 bits (382), Expect = 0.0
Identities = 397/402 (98%)
Strand = Plus / Plus
Query: 1 aatgttcttcttgaacctaaccctacaaaaccttttcagtaccttcactgttttagtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgttcttcttgaacctaaccctacaaaaccttttcagtaccttcactgttttagtaag 260
Query: 61 ggggaaaaacaacaacaaaacaaaacaaacaaaacaaaacccaaaacaacatgctaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaaaaacaacaacaaaacaaaacaaacaaaacaaaacccaaaacaacatgctaagaa 320
Query: 121 taggagacagagctcttcccagctagtcagagctacagaagaaggcctttggactgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggagacagagctcttcccagctagtcagagctacagaagaaggcctttggactgtctg 380
Query: 181 ccatctgctggagacaggagaagaactgagcaagcagttcaagaagcctccttgactggg 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatctgctggagacaggggaagaactgagcaagcagttcaagaagcctccttgactggg 440
Query: 241 ttctctgatcatggtagtatgtcctgctttgagagccaaaggactgagatcgatgacata 300
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 441 ttctctgatcatggtagtatgtcctgctttgagagccgaaggaatgagatcgatgacata 500
Query: 301 agtgccgtggagaatcgcagagcccacaacactggcaacattgcttttactgctgtctgc 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgctgtggagaatcgcagagcccacaacactggcaacattgcttttactgctgtctgc 560
Query: 361 cttggtttgtttggacttcgttttaaaattccatggctgata 402
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 cttggtttgtttggactttgttttaaaattccatggctgata 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
