Query= MSMg01no439_n22.b1 MSMg01no439_n22.b1 CHROMAT_FILE:
MSMg01no439_n22.b1 PHD_FILE: MSMg01no439_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:07 2005
(436 letters)
>mm_chr14_66238053_66238888
Length = 836
Score = 739 bits (382), Expect = 0.0
Identities = 414/428 (96%), Gaps = 6/428 (1%)
Strand = Plus / Minus
Query: 7 attctcttcctttgcagtttgattatttcatttctttgcagaatagcttctctccgactc 66
|||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 423 attctcttcctttgtagtttgattatttcatttctttgcagaacagcttctctctgactc 364
Query: 67 tgaatagcttgctagattaagaaagagaacaacgcagccaaaggctagggtcatcagcag 126
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 363 tgaatagcttgctagattaagaaagagaacaacgcagctaaaggctagggtcatcagcag 304
Query: 127 tggtgcaaggacaagtacacccagaagctcaagtgttgctttacaggattatgtaccacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tggtgcaaggacaagtacacccagaagctcaagtgttgctttacaggattatgtaccacc 244
Query: 187 agacacaaaggcactattaaaaaaatactggtccagatgctggagagacagctcagtggt 246
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 243 agacacaaaggcactattaaaaaaatactggtccagacgctggagagacagctcagtggt 184
Query: 247 ggaaggcaccttttgctatttcagatgacctgaatttggttaccagcatcctcttctgtg 306
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 183 ggaaggcaccttttgctatttcagatgacctgaatttggttcccagcatcctcttctgtg 124
Query: 307 gaccatatcagcctgtaattccagctccagggatccaatgccttctcctggcctccacag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaccatatcagcctgtaattccagctccagggatccaatgccttctcctggcctccacag 64
Query: 367 gtatccaaacttatatagcatgcacgcacgcgcgcacacatacacacacacacacacaca 426
|||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 63 gtatccaaacttatatagcatgcacgca------caaacacacacacacacacacacaca 10
Query: 427 cacacaca 434
||||||||
Sbjct: 9 cacacaca 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_n22.g1 MSMg01no439_n22.g1 CHROMAT_FILE:
MSMg01no439_n22.g1 PHD_FILE: MSMg01no439_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:07 2005
(485 letters)
>mm_chr14_66081243_66082127
Length = 885
Score = 915 bits (473), Expect = 0.0
Identities = 482/485 (99%)
Strand = Plus / Plus
Query: 1 tctgtgccttaacttttgctcaataaattcaagctttagaaagtgatattggccgccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtgccttaacttttgctcaataaattcaagctttagaaagtgatattggccgccaga 260
Query: 61 gacgggctgaccttcccctggagttccatgtcatcaagaccaaggaacaccagtgcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacgggctgaccttcccctggagttccatgtcatcaagaccaaggaacaccagtgcatcc 320
Query: 121 cattccagagtgggcgttaggatggcagcagcgttgctatcatccttctgatgaatgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattccagagtgggcgttaggatggcagcagcgttgctatcatccttctgatgaatgggt 380
Query: 181 catctgtgacatactgggatgcctggctctctggtgccagcactgaccccttcccttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catctgtgacatactgggatgcctggctctctggtgccagcactgaccccttcccttctt 440
Query: 241 ctagattcttgccctgttgctggtagcatctcctgggctcattgtgcatctgcctgtttg 300
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagagccttgccctgttgctggtagcatctcctgggctcattgtgcatctgcctgtttg 500
Query: 301 ttcctgtttcaaagggagagatgaatgtgctgggccagcagagttcctattgctgggtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcctgtttcaaagggagagatgaatgtgctgggccagcagagttcctattgctgggtca 560
Query: 361 tggcatagctgtaggggactgagaggcaattggttgcactttcagtttatatagtgggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggcatagctgtaggggactgagaggcaattggttgcactttcagtttatatagtgggag 620
Query: 421 atgactccaggctagaagcaactcagatgtggggcaaaggtccccgttgggtgtgaccct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgactccaggctagaagcaactcagatgtggggcaaaggtccccgttgggtgtgaccct 680
Query: 481 gaacg 485
|||||
Sbjct: 681 gaacg 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
