Query= MSMg01no441_k06.b1 MSMg01no441_k06.b1 CHROMAT_FILE:
MSMg01no441_k06.b1 PHD_FILE: MSMg01no441_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:30 2005
(479 letters)
>mm_chr14_105269386_105270264
Length = 879
Score = 905 bits (468), Expect = 0.0
Identities = 476/479 (99%)
Strand = Plus / Minus
Query: 1 ccctactgcaagnggtgcagagtctaaattaggacttgtcattgccaaagcctatacttt 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 679 ccctactgcaagtggtgcagagtctaaattaggacttgtcattgccaaagcctacacttt 620
Query: 61 atcaatgatcattttgcctataaattcctgacaacaaagtcatcaacctaaggaggtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atcaatgatcattttgcctataaattcctgacaacaaagtcatcaacctaaggaggtcaa 560
Query: 121 ttttcatgactgatagagagtgggaaaaaaatttatgaccgagttctttacatcataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttttcatgactgatagagagtgggaaaaaaatttatgaccgagttctttacatcataata 500
Query: 181 agtcaatttcctcatcaaaaatattagctaccaaggtctaaaagaggttattttcaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agtcaatttcctcatcaaaaatattagctaccaaggtctaaaagaggttattttcaaatg 440
Query: 241 ccaggcataaatatgttgatcattgttatactcagagtaattcttctgactataaatttt 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccaggcataaatatggtgatcattgttatactcagagtaattcttctgactataaatttt 380
Query: 301 ggaacaaagcagaaatttaagccaagttatatccttattaaaaggtagttattatgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggaacaaagcagaaatttaagccaagttatatccttattaaaaggtagttattatgataa 320
Query: 361 tagcataacagtagctgttcaaccaagagttttcttccgttatcagatatcatcttcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tagcataacagtagctgttcaaccaagagttttcttccgttatcagatatcatcttcaat 260
Query: 421 atgtgtgcttggatggtaatgccaaaagcatgaatatttatatctgaaatgtacacaca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atgtgtgcttggatggtaatgccaaaagcatgaatatttatatctgaaatgtacacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_k06.g1 MSMg01no441_k06.g1 CHROMAT_FILE:
MSMg01no441_k06.g1 PHD_FILE: MSMg01no441_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:30 2005
(393 letters)
>mm_chr14_105078489_105079281
Length = 793
Score = 706 bits (365), Expect = 0.0
Identities = 386/397 (97%), Gaps = 8/397 (2%)
Strand = Plus / Plus
Query: 1 cactttgggacaggaacgaggagaggaaaggactatatcactatttggaaatcaattctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactttgggacaggaacgaggagaggaaaggactatatcactatttggaaatcaattctt 260
Query: 61 ctagttaaccttcaacccttcgtagcactcagcaggctcaggttaaatgggcatttatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagttaaccttcaacccttcgtagcactcagcaggctcaggttaaatgggcatttatgg 320
Query: 121 atgcttttttttgaatgctaataggtaggataattacagtgttactttctaaaaagactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcttttttttgaatgctaataggtaggataattacagtgttactttctaaaaagactt 380
Query: 181 tataaataatcacgacggcttcagaaatgcagatggttcacaattttaaaaaacgtgcgg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tataaataatcacgacggcttcagaaatgcagatggttcacaattttaaaaaacatgcgg 440
Query: 241 ta----ttttttatgcatgcaacaccacgtaatcttaaaatactattattttaaactaaa 296
|| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaaatt----aagcatgcaacaccacgtaatcttaaaatactattattttaaactaaa 496
Query: 297 gatattgactgcggaccaacgaaaggtagtgacatacagttccagagtaaaccttataac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gatattgactgcggaccaacgaaaggtagtgacatacagttccagagtaaaccttataac 556
Query: 357 gtgtgaaggactgatgggacacacaggaaggaggcag 393
|||||||||||||| ||||||||||||||||||||||
Sbjct: 557 gtgtgaaggactgaggggacacacaggaaggaggcag 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
