Query= MSMg01no442_h05.b1 MSMg01no442_h05.b1 CHROMAT_FILE:
MSMg01no442_h05.b1 PHD_FILE: MSMg01no442_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:37 2005
(277 letters)
>mm_chr14_118172679_118173358
Length = 680
Score = 509 bits (263), Expect = e-148
Identities = 271/275 (98%), Gaps = 3/275 (1%)
Strand = Plus / Plus
Query: 5 gaattctccaccttcccagcagccaccgctcccacttcttgcccttcttcatcccccagc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaccctcccagcagccaccgctcccacttcttgcccttcttcatcccccagc 264
Query: 65 cagttctcagagaaaaagatgaatatcaggaatgatgttcacttcatgtctcgttgacct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagttctcagagaaaaagatgaatatcaggaatgatgttcacttcatgtctcgttgacct 324
Query: 125 agaaaggagagtgtgcagcaaggcatggcgctgcgctaatgatgctgagccagaaagcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaaaggagagtgtgcagcaaggcatggcgctgcgctaatgatgctgagccagaaagcaa 384
Query: 185 gaggtgaggaggaggaggaggagg---gagccgtaattgagggctgcctccatagccccg 241
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 gaggtgaggaggaggaggaggaggagggagccgtaattgagggctgcctccatagccccg 444
Query: 242 ttgccttcgtgtctgtgtctcttctcaggatcctg 276
|||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgccttcgtgtctgtgtctcttctcaggatcctg 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 680
Length adjustment: 9
Effective length of query: 268
Effective length of database: 671
Effective search space: 179828
Effective search space used: 179828
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_h05.g1 MSMg01no442_h05.g1 CHROMAT_FILE:
MSMg01no442_h05.g1 PHD_FILE: MSMg01no442_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:37 2005
(427 letters)
>mm_chr14_118341662_118342488
Length = 827
Score = 787 bits (407), Expect = 0.0
Identities = 421/427 (98%), Gaps = 3/427 (0%)
Strand = Plus / Minus
Query: 1 aacattggaaaccccagagataccttcctgtgccattcaggtattattattattattatt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 698 aacattggaaaccccagagataccttcctgtgccattcagg---tattattattattatt 642
Query: 61 tttttgattaaaaagaaaagacagcaaatgatcacattttatgtttgtacctaatgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tttttgattaaaaagaaaagacagcaaatgatcacattttatgtttgtacctaatgttct 582
Query: 121 aattatgccttgttgcctgtgatctcatgttccaggcaataatgtagaaagagtgccata 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 581 aattatgccttgttgcctgtgatctcatgttccaggcaataatgtaaaaagagtgccata 522
Query: 181 tgtccttgagaaaacacacaattggaccttgagctaataccaattaacttcaacagtcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgtccttgagaaaacacacaattggaccttgagctaataccaattaacttcaacagtcga 462
Query: 241 gagaaaagggacatcatttagtccccagaaattcacacaaaatcaaagggccgctttgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gagaaaagggacatcatttagtccccagaaattcacacaaaatcaaagggccgctttgcc 402
Query: 301 cagtagcctcttaattacgacatcatttgcttttgacgaatgaaaattatgaaccacttc 360
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 401 tagtagcctcttaattacgacatcatttgcttttgacgagtgaaaattatgaaccacttc 342
Query: 361 aaggagtgattttcttattgaattgtcaaattttaaagaagagctcctatgcgccaaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaggagtgattttcttattgaattgtcaaattttaaagaagagctcctatgcgccaaagg 282
Query: 421 ttctaga 427
|||||||
Sbjct: 281 ttctaga 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
