Query= MSMg01no442_l02.b1 MSMg01no442_l02.b1 CHROMAT_FILE:
MSMg01no442_l02.b1 PHD_FILE: MSMg01no442_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:58 2005
(310 letters)
>mm_chr14_41881683_41882393
Length = 711
Score = 487 bits (252), Expect = e-142
Identities = 298/320 (93%), Gaps = 12/320 (3%)
Strand = Plus / Minus
Query: 1 caggatgtggtgcctattagcacaccaaactgcatgctggcctccaggcttcctcagtat 60
|||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||
Sbjct: 358 caggatgtggtgcctattagcaaaccaaagtgcatgctggcctccaggctccctcagtat 299
Query: 61 cacaagtacctgtttcaaagttcatgttagcatccaaggtcttcttaccttctctcctac 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 298 cacaagtacctgtttcaaagttcatggtagcatccaaggtcttcttaccttctctcctac 239
Query: 121 cctaaactttcttccatcattggct-------ccccccccccccagttaaccttcttctt 173
||||||||| ||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 238 cctaaacttccttccatcattggcttccccccccccccccccccagttaaccttctcctt 179
Query: 174 ataaccctgctaatttttatatactttctctacctcactgtgtcctcccgttccatgc-- 231
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 178 ataaccctgctaatttttatatactttccctacctcactgtgtcctcccgttccatgccc 119
Query: 232 ---tcctgcttctctctttgccaggtccaatccactggccatgttcagtcatctttcgat 288
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tgctcctgcttctctccttgccaggtccaatccactggccatgttcagtcatctttcgat 59
Query: 289 gtcccccatctccaccccca 308
|||||||| | |||||||||
Sbjct: 58 gtcccccacccccaccccca 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_l02.g1 MSMg01no442_l02.g1 CHROMAT_FILE:
MSMg01no442_l02.g1 PHD_FILE: MSMg01no442_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:58 2005
(244 letters)
>mm_chr14_41739831_41740475
Length = 645
Score = 346 bits (179), Expect = e-100
Identities = 207/229 (90%), Gaps = 20/229 (8%)
Strand = Plus / Plus
Query: 5 cctcactttggcaatagtgtgacttattcactgagccctctcccagaccctcaacagaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cctcactttggcaatagtgtgacttattcactgagccctctcccagaccctcaacagaat 264
Query: 65 ttttaaaggggatttctgaagaagaaataaataagaaaaaaacacagtgaacaagatgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttaaaggggatttctgaagaagaaataaataagaaaaaaacacagtgaacaagatgga 324
Query: 125 agtgaggaactccacacagcaggcaggcctctaacagttactacaccagtgagtcactgc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtgaggaactccacacagcaggcaggcctctaacagttactacaccagtgag------- 377
Query: 185 acaaaagagatagccacatgcacacacgtgcacccacacacacacacac 233
|||||||||||||||||||||||| ||||| |||||
Sbjct: 378 -------------ccacatgcacacacgtgcacccacccacacccacac 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
