Query= MSMg01no443_f06.b1 MSMg01no443_f06.b1 CHROMAT_FILE:
MSMg01no443_f06.b1 PHD_FILE: MSMg01no443_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:54 2005
(238 letters)
>mm_chr14_40542693_40543330
Length = 638
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%)
Strand = Plus / Plus
Query: 1 tcatgattgcccagaaagcactgagctacatcatgcttgtgttgagacccagagagtggg 60
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tcatgattacccagaaagcactgagctacatcatgcttgtggtgagacccagagagtggg 260
Query: 61 gttaaagatggttagacggatagaaaggtttcctcataggtctgatacctggtcaggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaaagatggttagacggatagaaaggtttcctcataggtctgatacctggtcaggttg 320
Query: 121 catatttttctttgcagtatactttccattttcctgatctaaataattttctctttgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 321 catatttttctttgcagtatactttccattttcctgatctaaataattttctcagtgcca 380
Query: 181 atgaaatctgcttatgaaaacttatgctacctgacataattcttgtattgtggggaga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaatctgcttatgaaaacttatgctacctgacataattcttgtattgtggggaga 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_f06.g1 MSMg01no443_f06.g1 CHROMAT_FILE:
MSMg01no443_f06.g1 PHD_FILE: MSMg01no443_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:54 2005
(195 letters)
>mm_chr14_40707435_40708028
Length = 594
Score = 265 bits (137), Expect = 1e-75
Identities = 179/193 (92%), Gaps = 1/193 (0%)
Strand = Plus / Minus
Query: 1 agtttcagtcttgaagatttattatttaatatatggttctaggaatttatataattactt 60
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 392 agtttcagtcttgaagatttattatttaatatatggtactaggaacttatataattactt 333
Query: 61 ttatctcttaaccaaatatttattaataaagataagacagaaatatagtaaaaaggacac 120
|||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||| ||||
Sbjct: 332 ttatcttttaacaaaatatttattaataaaaataagacaaaaatatagaaaaaag-acac 274
Query: 121 aatatttttctattataagagtttgcttgaaataatcaattgctacaataatttagcagg 180
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 273 aataaaattctactataagagtttgcatgaaataatcaattgctacaataattttgcagg 214
Query: 181 gctaaaaccattt 193
|||||||||||||
Sbjct: 213 gctaaaaccattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 594
Length adjustment: 8
Effective length of query: 187
Effective length of database: 586
Effective search space: 109582
Effective search space used: 109582
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
