Query= MSMg01no443_n09.b1 MSMg01no443_n09.b1 CHROMAT_FILE:
MSMg01no443_n09.b1 PHD_FILE: MSMg01no443_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:33 2005
(412 letters)
>mm_chr14_115332656_115333467
Length = 812
Score = 397 bits (205), Expect = e-114
Identities = 214/217 (98%)
Strand = Plus / Plus
Query: 1 ctaaattagcagcggagaatgttcctaaattgggtgagaaatcaaatggcaattcttgag 60
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaattagcagctgagactgttcctaaattgggtgagaaatcaaatggcaattcttgag 260
Query: 61 ataaaaattacataaaaaaatatcaggattgataggttggtagatagaaaagataggccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaaattacataaaaaaatatcaggattgataggttggtagatagaaaagataggccg 320
Query: 121 acagaaaataagtgataagcaggttagattttatatataattgataattaagaggtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagaaaataagtgataagcaggttagattttatatataattgataattaagaggtaaca 380
Query: 181 tagtgatattatacagtagacattatataagaatttt 217
||||||||||||||||||||||||| |||||||||||
Sbjct: 381 tagtgatattatacagtagacattagataagaatttt 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_n09.g1 MSMg01no443_n09.g1 CHROMAT_FILE:
MSMg01no443_n09.g1 PHD_FILE: MSMg01no443_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:33 2005
(367 letters)
>mm_chr14_115406087_115406852
Length = 766
Score = 634 bits (328), Expect = 0.0
Identities = 358/368 (97%), Gaps = 3/368 (0%)
Strand = Plus / Minus
Query: 1 ctcctcgattccatcctgaaatgcatcctcaacagactgtttcctgttggtgtatttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctcctcgattccatcctgaaatgcatcctcaacagactgtttcctgttggtgtatttcat 507
Query: 61 agtgtgtgctgtgaaggaagaggatatttccccaactcacatttcctctcgttgaactgg 120
|| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 506 agcgtgtgctgtgaagggagaggatgtttccccaactcacatttcctctcgttgaactgg 447
Query: 121 gatgagggttgacctgcctctctgcacatgttctataaaattatc-cagtgtcatgtgat 179
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 446 gatgagggttgacctgcctctctgcacatgttctataaaatta-cgcagtgtcatgtgat 388
Query: 180 caaggaaaacacaagaaatgaaaagatgcatcaggtgtcccgtgagactaagatttcagt 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 caaggaaaacgcaagaaatgaaaagatgcatcaggtgtcccgtgagactaagatttcagt 328
Query: 240 tcttttgattgtttaaatgcaattatttattaatttaaaagttgcctgtgttctttccct 299
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcttttga-tgcagaaatgcaattatttattaatttaaaagttgcctgtgttctttccct 269
Query: 300 attgcctgaagtaaccgacattgttttccctttcctctaaaatataccctgcgatgtaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attgcctgaagtaaccgacattgttttccctttcctctaaaatataccctgcgatgtaca 209
Query: 360 tttagggt 367
||||||||
Sbjct: 208 tttagggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
