Query= MSMg01no444_d10.b1 MSMg01no444_d10.b1 CHROMAT_FILE:
MSMg01no444_d10.b1 PHD_FILE: MSMg01no444_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:03 2005
(429 letters)
>mm_chr14_31376728_31377555
Length = 828
Score = 750 bits (388), Expect = 0.0
Identities = 417/428 (97%), Gaps = 5/428 (1%)
Strand = Plus / Plus
Query: 4 ggaattcatcacaattaccattaagcctgcctgctgcctttaatccctccattcaggctg 63
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaatttatcacaattaacattaagcctgcctgctgcctttaatccctccattcaggctg 263
Query: 64 cagagcagagtcaagtctacacagtgagactctgtcttcacaacaaaaaaaggaatcaca 123
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagagcagagtcaaggctacatagtgagactctgtcttcacaacaaaaaaaggaatcaca 323
Query: 124 cacattaggcaggcacctctacctgaaactgttgttggttttggactggcctaagttttt 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cacattaggcaggcacctcaacctgaaactgttgttggttttggactggcctaagttttt 383
Query: 184 aagcacatcttatatctttgatttttttttggggg-ggggg-gcagggaagctaaggcct 241
||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 384 aagcacatcttatatctttga---ttttttgggggagggggcgcagggaagctaaggcct 440
Query: 242 tgattatagtaagctagcaactcttctactgacttgttccccaagccccaacatctttga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgattatagtaagctagcaactcttctactgacttgttccccaagccccaacatctttga 500
Query: 302 attttttgaaccctgagcaagtctagtattaagaattctgtcattggctgggtgtctcta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 attttttgaaccctgagcaagtctagtattaagaattctgtcattggctgggtatctcta 560
Query: 362 gagagcgatactgatacctgtattcaaatggacaggacaggcatctccagctagggtttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagagcgatactgatacctgtattcaaatggacaggacaggcatctccagctagggtttc 620
Query: 422 tctagacc 429
||||||||
Sbjct: 621 tctagacc 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 828
Length adjustment: 9
Effective length of query: 420
Effective length of database: 819
Effective search space: 343980
Effective search space used: 343980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_d10.g1 MSMg01no444_d10.g1 CHROMAT_FILE:
MSMg01no444_d10.g1 PHD_FILE: MSMg01no444_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:03 2005
(532 letters)
>mm_chr14_31516121_31517052
Length = 932
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Minus
Query: 249 ctactgtttgtcaggagcactttttaatattttacgtatttattttgagacagggtctca 308
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 914 ctactgtttgtcaggagcactttttaatattttacatatttattttgagacagggtctca 855
Query: 309 aatgtacctctggctactttagaacttgctatgtagaccaaattgacctcaaattcacag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 aatgtacctctggctactttagaacttgctatgtagaccaaattgacctcaaattcacag 795
Query: 369 agatctaccggcctctgccgcccaagtactggtattaaaggtatagaccaccacacctgg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 agatctaccggcctctgccgcccaagtactggtattaaaggtatagaccaccacacctgg 735
Query: 429 ctagaagtatatttttaaaaacttctaagtgggccaggtattgtatatatgccttcaata 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctagaagtatatttttaaaaacttctaagtgggccaggtattgtatatatgccttcaata 675
Query: 489 ccaacactggggaaacaaaggcagaactcttgagttctaggcca 532
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ccaacactggggaaacaaaggcagaactcttgagttctaggcca 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
