Query= MSMg01no444_i06.b1 MSMg01no444_i06.b1 CHROMAT_FILE:
MSMg01no444_i06.b1 PHD_FILE: MSMg01no444_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:26 2005
(241 letters)
>mm_chr14_29180484_29181125
Length = 642
Score = 364 bits (188), Expect = e-105
Identities = 222/238 (93%), Gaps = 10/238 (4%)
Strand = Plus / Minus
Query: 3 gagggaatctgagaaccaggcactgaatactgaacctgagaga--tgctgatcagggaag 60
||||||||||||||||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 460 gagggaatctgagaaccaggc-------actgaacctgagagatgtgccgatcagggaag 408
Query: 61 agacttggtggggtgccataactggctgaggtctgtggattaggtgggctcccagggtta 120
|||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 407 agac-tggtggggtgccatagctgactgaggtctgtggattaggtggggtcccagggtta 349
Query: 121 tgagtcaggggaactgcccccagaagttggaggtatgtgggtcacactagaactatgcta 180
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 348 tgagtcagggaaactgcccccagaagttggaggtatgtgggtcacactaaaactatgcta 289
Query: 181 ggataggcagggagtagtggctggaagaggcactctgtgagaaaaactggctaacttc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggataggcagggagtagtggctggaagaggcactctgtgagaaaaactggctaacttc 231
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_i06.g1 MSMg01no444_i06.g1 CHROMAT_FILE:
MSMg01no444_i06.g1 PHD_FILE: MSMg01no444_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:26 2005
(240 letters)
>mm_chr14_28986278_28986917
Length = 640
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 1 ttttttctagtgttttccctgtagttggtatacatggttaaataaaacctatgactaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttttctagtgttttccctgtagttggtatacatggttaaataaaacctatgactaaat 260
Query: 61 cattgtaaatagttgtagagaagtgccgttctctgtggaaaagttcatggaagaaaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattgtaaatagttgtagagaagtgccgttctctgtggaaaagttcatggaagaaaagtt 320
Query: 121 ggattataaagtctggaaggatggggctggagagatggctcagctgttaagagcactgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggattataaagtctggaaggatggggctggagagatggctcagctgttaagagcactgac 380
Query: 181 tggtctttcagaggtcctgggttcaattcccagcaaacacattatggctcacaaccatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtctttcagaggtcctgggttcaattcccagcaaacacattatggctcacaaccatct 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
