Query= MSMg01no445_b15.b1 MSMg01no445_b15.b1 CHROMAT_FILE:
MSMg01no445_b15.b1 PHD_FILE: MSMg01no445_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:12 2005
(542 letters)
>mm_chr14_12020560_12021503
Length = 944
Score = 982 bits (508), Expect = 0.0
Identities = 532/540 (98%), Gaps = 2/540 (0%)
Strand = Plus / Minus
Query: 5 gaattccttattat-tctttacattgtttccaat-atttttgcttctaaaagaatgccaa 62
|||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 744 gaattccttattatatatttacattgtttccaataatttttgcttctaaaagaatgccaa 685
Query: 63 ggtaactatagagataaatctttgtatgcaactaaaatagaaacttttaattttataagt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggtaactatagagataaatctttgtatgcaactaaaatagaaacttttaattttataagt 625
Query: 123 atccttttgaagctgaatgagtaattaaaaacaatcatattactactctgccttttaacc 182
|| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 attctattgaagctgaatgagtaattaaaaacaatcatatcactactctgccttttaacc 565
Query: 183 tccctgtgccctgcccaactgcagttgcttatgatgtcaagaaatctacttctcagagtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tccctgtgccctgcccaactgcagttgcttatgatgtcaagaaatctacttctcagagtt 505
Query: 243 tgaggtaagattctggttgctttttctgttctaatgcttacgttttctttaatggaatta 302
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaggtaagatgctggttgctttttctgttctaatgcttacgttttctttaatggaatta 445
Query: 303 attcatctttgaaatcaacagaaccataagctttaccatatagcatgcatgagtgacatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attcatctttgaaatcaacagaaccataagctttaccatatagcatgcatgagtgacatg 385
Query: 363 attctgccatggcaatgtagttcgggatagttggagacttgtgtctctcaacttaaagca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attctgccatggcaatgtagttcgggatagttggagacttgtgtctctcaacttaaagca 325
Query: 423 tgtagccatagtaggaatatagataataaggtattcaaggaacacttccaatgcatcgac 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 tgtagccatagtaggaatatagataataaggtattcaaggaacacttccaatgcattgac 265
Query: 483 tcatttaatcttttcatcgaaaacaggtattgtaaggaggtgggaatagggatgctgtaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcatttaatcttttcatcgaaaacaggtattgtaaggaggtgggaatagggatgctgtaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 944
Length adjustment: 10
Effective length of query: 532
Effective length of database: 934
Effective search space: 496888
Effective search space used: 496888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_b15.g1 MSMg01no445_b15.g1 CHROMAT_FILE:
MSMg01no445_b15.g1 PHD_FILE: MSMg01no445_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:12 2005
(487 letters)
>mm_chr14_11862524_11863410
Length = 887
Score = 934 bits (483), Expect = 0.0
Identities = 486/487 (99%)
Strand = Plus / Plus
Query: 1 tcagcatccataattacttaaatcaacttctccatatacatctctttgagctgtttccag 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tcagcatccataattacttaaatcaacttctccatataaatctctttgagctgtttccag 260
Query: 61 tctctgaagaaggctgactaatgaagtatggcttctggcttacaaaggacggctaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctgaagaaggctgactaatgaagtatggcttctggcttacaaaggacggctaagaac 320
Query: 121 tcaaagcttctaggttaaatgttgggctctgtcacctctaaaaataataaaagcaaacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaagcttctaggttaaatgttgggctctgtcacctctaaaaataataaaagcaaacta 380
Query: 181 aaaaatgtcttaaagatttcatagcactaagagttacttataaaactcataggatgttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaatgtcttaaagatttcatagcactaagagttacttataaaactcataggatgttga 440
Query: 241 actttcatagaaaagagtcaataagtatataatattatattcaaacatatcttaaggata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actttcatagaaaagagtcaataagtatataatattatattcaaacatatcttaaggata 500
Query: 301 taaactctcgaagtcttttttatattagatggtcattttgaaaaggcaatcaacaagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaactctcgaagtcttttttatattagatggtcattttgaaaaggcaatcaacaagtca 560
Query: 361 cgtcctcaagcaaagtaaaaattatatttgaaccacagactacagaaaaatattcatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtcctcaagcaaagtaaaaattatatttgaaccacagactacagaaaaatattcatcca 620
Query: 421 acaacaaatcaataattgtagaagagctagtgcatcctctcttgacatttctacaaagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaacaaatcaataattgtagaagagctagtgcatcctctcttgacatttctacaaagct 680
Query: 481 aacccta 487
|||||||
Sbjct: 681 aacccta 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
