Query= MSMg01no446_b24.b1 MSMg01no446_b24.b1 CHROMAT_FILE:
MSMg01no446_b24.b1 PHD_FILE: MSMg01no446_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:33 2005
(486 letters)
>mm_chr14_10838486_10839371
Length = 886
Score = 862 bits (446), Expect = 0.0
Identities = 476/486 (97%)
Strand = Plus / Plus
Query: 1 atgggaattctagcaaattagctcatatgcctgaatataatatagatcaggatgttcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 atgggaattctagcaaattagctcatatgcctgaatataatatagatcaggatattcaaa 260
Query: 61 ggatgtaaaattctgatcatttctcacaaatctcaacatcagcaacaaatctaagccaac 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ggatgtaaaattctgatcatttctcacaaatcccaacatcagcaacaaatctaagccaac 320
Query: 121 gactccttctctgagtcactctcgaagcctctgaactcacctttccctgaccttcctccc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 321 gactccttctctgagtcactctcgaagcctctaaactcacctttccctgactttcctccc 380
Query: 181 aaatagtctatttacccaacaaccaggaaatccttaaagagagatcaaatggcagtgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatagtctatttacccaacaaccaggaaatccttaaagagagatcaaatggcagtgcac 440
Query: 241 ttcggcagtctccccggtctccccttacaaactcccggccacgctctgaagggcttttcc 300
| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 tgcagcagtctccccggtctccccttacaaactcctggccacgctctgaagggcttttcc 500
Query: 301 acttgagactcatgtctattcatgcaacccagattcctggaatacactcacaaggctgaa 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttgagactcatgtctatttatgcaacccagattcctggaatacactcacaaggctgaa 560
Query: 361 gccctcgtggtttaagaagactcttaaaatatcaaaagtacagaagagaagccagcaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccctcgtggtttaagaagactcttaaaatatcaaaagtacagaagagaagccagcaggc 620
Query: 421 cgcaggctctgcaaaagtgttagaactctgcttcactctagttcatgctgaagcatcatt 480
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 ctcaggctctgcaaaagtgttagaactctgcttcactctagttcatactgaagcatcatt 680
Query: 481 tcttca 486
||||||
Sbjct: 681 tcttca 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_b24.g1 MSMg01no446_b24.g1 CHROMAT_FILE:
MSMg01no446_b24.g1 PHD_FILE: MSMg01no446_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:34 2005
(292 letters)
>mm_chr14_11023970_11024664
Length = 695
Score = 427 bits (221), Expect = e-124
Identities = 273/297 (91%), Gaps = 15/297 (5%)
Strand = Plus / Minus
Query: 4 tagactgcatgaatccaaaagcttataaaaaaaaaatcaattagtatcatgagtcaaatt 63
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 449 tagactgcatgaatccaaaagcttat-caaaaaaaatcaatcagtatcatgagtcaaatt 391
Query: 64 tggcttaaacacgtgatacataaaatgtgacttattccttgttgatgctctgatgttact 123
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tggcttaaacacattatacataaaatgtgacttattccttgttgatgctctgatgttacc 331
Query: 124 ttgaaagagaaagaaacggttctcatataaggaaacaaacaaaa-cgacacaacaa---- 178
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 330 ttgaaagagaaagaaacagttctcatataaggaaacaaacaaaaacgacacaacaagcca 271
Query: 179 -ttttttcacatgaaaaaataagaa---actggaaaagtcctcaagtacctcagagaagc 234
| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 270 gt-----cacatgaaaaaataagaagaaactggaaaagtcctcaagtacctcagagaagc 216
Query: 235 tctaaagaaaagtattttatttttaaaatttatgggagggaaataggttgcttttaa 291
|||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct: 215 tctaaagaaaagtaattcaattttaaaatttatgggagggaaataggttgcttttaa 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 695
Length adjustment: 9
Effective length of query: 283
Effective length of database: 686
Effective search space: 194138
Effective search space used: 194138
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
