Query= MSMg01no447_a04.b1 MSMg01no447_a04.b1 CHROMAT_FILE:
MSMg01no447_a04.b1 PHD_FILE: MSMg01no447_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:42 2005
(381 letters)
>mm_chr14_120022979_120023759
Length = 781
Score = 687 bits (355), Expect = 0.0
Identities = 373/379 (98%), Gaps = 2/379 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctaagatacgcattattattttatgtttcattttataggagtatacagtgtc 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctaagacaggcattattattttatgtttcattttataggagtatacagtgtc 263
Query: 64 aacactttcagtgttgttataaataactaataattataggtgctccggggagtcagggat 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 264 aacactttcagtgttgttataaataactaataattataggtgcttcggggagtcagggat 323
Query: 124 tttgtaagcaataaacatgcttttggtttgcatatcctttctgattaatgcgcaaccttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttgtaagcaataaacatgcttttggtttgcatatcctttctgattaatgcgcaaccttt 383
Query: 184 gccactcgctcacttcatcctgatttaattgtggaacattttagccctaattgtagctgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccactcgctcacttcatcctgatttaattgtggaacattttagccctaattgtagctgt 443
Query: 244 aagtttttatgccacacagattctttactcatacctctttgcccacttactgcttaatgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagtttttatgccacacagattctttactcatacctctttgcccacttactgcttaatgt 503
Query: 304 catttgtattcctgcacctctaaatatcaagtctcagaaaggctttcactg-atataaat 362
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 504 catttgtattcctgcacctctaaatatcaagtctcagaaaggctttca-tggatataaat 562
Query: 363 cacaccttccatcagcaag 381
||||||||||||| |||||
Sbjct: 563 cacaccttccatcggcaag 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_a04.g1 MSMg01no447_a04.g1 CHROMAT_FILE:
MSMg01no447_a04.g1 PHD_FILE: MSMg01no447_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:42 2005
(413 letters)
>mm_chr14_120209857_120210669
Length = 813
Score = 683 bits (353), Expect = 0.0
Identities = 396/415 (95%), Gaps = 9/415 (2%)
Strand = Plus / Minus
Query: 6 tcccctctggatccaataggctgggatgaatttgcaccctctccccacacaaacacaact 65
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 415 tcccctctggatccaataggctgggatgaatttgcaacctctccccacacaaacacaact 356
Query: 66 taaagaaatctttttaaaaatatatattagatgttttctctcatttgggaatctttatac 125
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 355 taaagaaatctttttaaatatatatattagatgttttctctcatttgggaatctttgtac 296
Query: 126 atataaacaatcatcacaaagctagagtggtaaagggagagacaaggcaggagaaaggag 185
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atataaaaaatcatcacaaagctagagtggtaaagggagagacaaggcaggagaaaggag 236
Query: 186 aggcaatgcattatgggaggtgtaagcttctactggctggttttgtttcagtttgacaca 245
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 235 aggcaatgcattatgggaggtgtaagcttctactggctggttttgtttcagcttgacaca 176
Query: 246 agctggagttgacaaagagaaaggagcctcccttgagaaaatgcctccatgagatccagt 305
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 175 agctggggttgacaaagagaaaggagcctcccttgagaaaatgtctccatgagatccagt 116
Query: 306 tgtaaagcattttctcaattagtgatcaagaatgggagggcccattgtgaatggcaccat 365
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 115 tgtaaggcattttctcaattagtgatcaagaatgggagggcccattgtgaatggtaccat 56
Query: 366 ccctgggctccgag----gg-----ataagaaagcaggctgagcaagccagggga 411
||||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct: 55 ccctgggcttcgagtcctgggttctataagaaagcaggctgagcaagccagggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
