Query= MSMg01no447_b08.b1 MSMg01no447_b08.b1 CHROMAT_FILE:
MSMg01no447_b08.b1 PHD_FILE: MSMg01no447_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:48 2005
(597 letters)
>mm_chr14_81225214_81226208
Length = 995
Score = 1096 bits (567), Expect = 0.0
Identities = 586/593 (98%), Gaps = 3/593 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttatacttcgcggggacccaaattagcataatataagtagcatcagatgaaa 64
|||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttgtatactttg-ggggacccaaattagcataatataagtagcatcagatgaaa 264
Query: 65 cccatgaagactaggtataagaatcagttgttgttttactataaacatccagggatatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccatgaagactaggtataagaatcagttgttgttttactataaacatccagggatatgt 324
Query: 125 gcattgtctctttccttgttatcctttttgatagattggcaattgtttcctaagcttatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcattgtctctttccttgttatcctttttgatagattggcaattgtttcctaagcttatg 384
Query: 185 tctttcatgtagtattaatcaactgtgcgaatatcaaacaactcttccttgttcataaca 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 tctttcatgtagtattaatcaactgtgcaaatatcaaacaactcttccttgttcataaca 444
Query: 245 ttcaaactcaacatcttgcacaaaggtatagaataattatgtatgctttatgctttcagt 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 ttcaaactcaacatcttgcacaaaggtatagaataattatgcatgctttatgctttcagt 504
Query: 305 gtaaccataggtatcaattttaaaaacattttgccttgcactgaggatctttccagtgtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtaaccataggtatcaattttaaaaacattttgccttgcactgaggatctttccagtgtg 564
Query: 365 tgagagaaaggaatagagtatgtgttttgttttgtttttattgacctggggaaaggtcca 424
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagagaaaggaatagagt--gtgttttgttttgtttttattgacctggggaaaggtcca 622
Query: 425 gtaggaatctgacatatgcaaatcaatgtcattgctttgggagcattaaaactaagatag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtaggaatctgacatatgcaaatcaatgtcattgctttgggagcattaaaactaagatag 682
Query: 485 aaaaatagttaacatgcttttgattcagagtgtctattttcagaatactgccagagtgga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaaaatagttaacatgcttttgattcagagtgtctattttcagaatactgccagagtgga 742
Query: 545 aattattttaaaactttagtaagtgcattaaaataatatattgcaatgcataa 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aattattttaaaactttagtaagtgcattaaaataatatattgcaatgcataa 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 995
Length adjustment: 10
Effective length of query: 587
Effective length of database: 985
Effective search space: 578195
Effective search space used: 578195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_b08.g1 MSMg01no447_b08.g1 CHROMAT_FILE:
MSMg01no447_b08.g1 PHD_FILE: MSMg01no447_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:48 2005
(547 letters)
>mm_chr14_81359929_81360874
Length = 946
Score = 1042 bits (539), Expect = 0.0
Identities = 545/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 1 agtgggaagataccagagaacagccagatatgctgaccacagtttgaagcccagcactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 agtgggaagataccagagaacagccagatatgctgaccacagtttgaagcccagcactca 687
Query: 61 taaagagttctgagatataaggaccctgaggactaggctatcacaggtcatatatacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 taaagagttctgagatataaggaccctgaggactaggctatcacaggtcatatatacttt 627
Query: 121 gatttgaagaaaaaggaagggtaaagtgggtgcagataacttcagtaatcattaaaatgc 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gatttgaag-aaaaggaagggtaaagtgggtgcagataacttcagtaatcattaaaatgc 568
Query: 181 taatgagaacatcttagaccacatcctctgttttatatattcttccagaattctccttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 taatgagaacatcttagaccacatcctctgttttatatattcttccagaattctccttta 508
Query: 241 tattagtcataaaaggacgtatagaagttagtctgattctttgcaggcaaaagccatgta 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tattagtcataaaaggacatatagaagttagtctgattctttgcaggcaaaagccatgta 448
Query: 301 tccttccagggatatgaactatccatctgtctcctttcacagggcagcaacaacatacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tccttccagggatatgaactatccatctgtctcctttcacagggcagcaacaacatacaa 388
Query: 361 gcaaacaaatatctgctgattgggtaacagacttggagataagaactgtatctgaaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcaaacaaatatctgctgattgggtaacagacttggagataagaactgtatctgaaaaca 328
Query: 421 ttagttacattttctcattgatatcactatttattaatacattctgaattttttaagtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttagttacattttctcattgatatcactatttattaatacattctgaattttttaagtta 268
Query: 481 gcatggtttacattccaattttagtgtaaaaatttccccaaaatataaagtaataatttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcatggtttacattccaattttagtgtaaaaatttccccaaaatataaagtaataatttt 208
Query: 541 cattgcc 547
|||||||
Sbjct: 207 cattgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
