Query= MSMg01no447_o08.b1 MSMg01no447_o08.b1 CHROMAT_FILE:
MSMg01no447_o08.b1 PHD_FILE: MSMg01no447_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:57 2005
(366 letters)
>mm_chr14_71958028_71958794
Length = 767
Score = 679 bits (351), Expect = 0.0
Identities = 363/367 (98%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 1 cattgctcagcagagaggaagactaaacccccatgcctagaacccagtctgctctgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgctcagcagagaggaagactaaacccccatgcctagaacccagtctgctctgaaac 260
Query: 61 caactttaaaccagtctttagctgcactttcctggtaattttattcatcctgtcaaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caactttaaaccagtctttagctgcactttcctggtaattttattcatcctgtcaaggta 320
Query: 121 cagacgcagccatgaagctgcatgggcaaatccacaaactctcatgttccatgctagagg 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagacacagccatgaagctgcatgggcaaatccacaaactctcatgttccatgctagagg 380
Query: 181 ttcagttgtggaaggtgtaggtgcaagcctatacacattcacaaggaaagtgcatggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagttgtggaaggtgtaggtgcaagcctatacacattcacaaggaaagtgcatggcta 440
Query: 241 actgctgaatggttgctatccagttctatg-tgatgtacttccttaattatccagatata 299
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 441 actgctgaatggttgctatccagttctatggtgatgtacttccttaattacccagatata 500
Query: 300 agtttgttgctaatacatgcatgcctccatctaaaagtctattcttcctttcatacatgc 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtttgtagctaatacatgcatgcctccatctaaaagtctattcttcctttcatacatgc 560
Query: 360 atggatg 366
|||||||
Sbjct: 561 atggatg 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 767
Length adjustment: 9
Effective length of query: 357
Effective length of database: 758
Effective search space: 270606
Effective search space used: 270606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_o08.g1 MSMg01no447_o08.g1 CHROMAT_FILE:
MSMg01no447_o08.g1 PHD_FILE: MSMg01no447_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:57 2005
(183 letters)
>mm_chr14_72123193_72123775
Length = 583
Score = 331 bits (171), Expect = 2e-95
Identities = 177/179 (98%)
Strand = Plus / Minus
Query: 1 ctcccatgggtcttctagaagaagacagggtgttgtaaaggaagcattcttggcaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctcccatgggtcttctagaagaagacagggtgttgtaaaggaagcattcttggcaatatc 320
Query: 61 cctatggtgacatttgtgggactattaatctaagcctctcactggctcagtgccaaatca 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 319 cctacggtgacatttgtgggactattaatctaagcctctcactggctcagtgccaaagca 260
Query: 121 cactatatatagaaaaggcaaagtggtctggaaagaagtggttttcagggatgttctaa 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cactatatatagaaaaggcaaagtggtctggaaagaagtggttttcagggatgttctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
