Query= MSMg01no449_f19.b1 MSMg01no449_f19.b1 CHROMAT_FILE:
MSMg01no449_f19.b1 PHD_FILE: MSMg01no449_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:58 2005
(618 letters)
>mm_chr14_13012550_13013567
Length = 1018
Score = 1164 bits (602), Expect = 0.0
Identities = 611/614 (99%)
Strand = Plus / Minus
Query: 5 gaattccatatatattgcctaatttaatctttatagaatgggtattctataaagaagact 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 gaattccatatatactgtctaatttaatctttatagaatgggtattctataaagaagact 936
Query: 65 tctcaaaagacccatttcctagatgaggaaattgagtctcaaatggatcccatgccaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 tctcaaaagacccatttcctagatgaggaaattgagtctcaaatggatcccatgccaaag 876
Query: 125 agccaggaagtggtagagctaatgtgacaatccacatgtccctgagtcaaggtttgtagc 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 875 agccaggaagtggtagagctaatgtgacaatccacatgttcctgagtcaaggtttgtagc 816
Query: 185 cacactataaaatatgcatttgatactgcgtaactcacacttagagtcgacaaatacctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cacactataaaatatgcatttgatactgcgtaactcacacttagagtcgacaaatacctg 756
Query: 245 cagttccttaggatgatctcaacttaggtagacctgatatgtttccctcagtcctaagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cagttccttaggatgatctcaacttaggtagacctgatatgtttccctcagtcctaagca 696
Query: 305 aagaagttctcagattccttgtaagcaactgcagacacgaggcatctcctgggtgacgca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aagaagttctcagattccttgtaagcaactgcagacacgaggcatctcctgggtgacgca 636
Query: 365 cactgggcctgtggcaagtccacgccatactaagagctaagcacatacacaggctgaata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cactgggcctgtggcaagtccacgccatactaagagctaagcacatacacaggctgaata 576
Query: 425 gtgtctgagtgtctgaccatggacggcatttaccttagtgttggacatgagtcatgctgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtgtctgagtgtctgaccatggacggcatttaccttagtgttggacatgagtcatgctgg 516
Query: 485 tcctttaaagtactgcagaaagaaatgtcgtcatggactgggcataagaactgttcacag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tcctttaaagtactgcagaaagaaatgtcgtcatggactgggcataagaactgttcacag 456
Query: 545 gatggtcacagacccctctcagagaagagctttaggtttaaaacaataaagagaggtttc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gatggtcacagacccctctcagagaagagctttaggtttaaaacaataaagagaggtttc 396
Query: 605 tagtcccatatttg 618
||||||||||||||
Sbjct: 395 tagtcccatatttg 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_f19.g1 MSMg01no449_f19.g1 CHROMAT_FILE:
MSMg01no449_f19.g1 PHD_FILE: MSMg01no449_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:58 2005
(483 letters)
>mm_chr14_12854680_12855564
Length = 885
Score = 859 bits (444), Expect = 0.0
Identities = 475/486 (97%), Gaps = 4/486 (0%)
Strand = Plus / Plus
Query: 1 tgtcccagtggacactaatacctccccagtcccttcaccctagccccagccgtgtgcact 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcccaatggacactaatacctccccagtcccttcaccctagccccagccgtgtgcact 260
Query: 61 aggctggcttgctgcttctctggatttgactgctctgagaatggcatctaagtggtggag 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 aggctggcttgctgcttctctggatttgactgctcagagaatggcatctaagtggtggag 320
Query: 121 aacttgcatttcctaatgttgtcttatcttctctgtccattgttattcctgatgatgaga 180
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 321 aacttgcatttcctaatgttgtcttatcttctctgt-cattgttatccctgatgatgaga 379
Query: 181 ttctgaaacccagtgttagcgtctgggaaattgatggaaaggagaggtactgagcccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctgaaacccagtgttagcgtctgggaaattgatggaaaggagaggtactgagcccagc 439
Query: 241 acactgtgttatctctctctaagaccatgctgtgctctgccctgcccagcgtgggacagc 300
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 acactgtgaaatctctctctaagaccatgctgtgctcttccctgcccagcgtgggacagc 499
Query: 301 cttgcttccccatcaagttctcaaagatggcttggtatagtgtcttttaatatccagatt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 cttgcttccccatcaagttctcaaagatggcttggtatagtgtcttttaatagccagatt 559
Query: 361 ggtaactcagcaaataaactcaccatcagaggtgctgaggtaagtcagttaagagct--a 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 560 ggtaactcagcaaataaactcaccatcagaggtgctgaggtaagtcagttaagagctgta 619
Query: 419 t-atcacaacggagacatgctcttttctttatgtgtgcctccttcgaagcgttggcgagc 477
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttatcacaacggagacatgctcttttctttatgtgtgcctccttcgaagcgttggcgagc 679
Query: 478 gagagc 483
||||||
Sbjct: 680 gagagc 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 885
Length adjustment: 10
Effective length of query: 473
Effective length of database: 875
Effective search space: 413875
Effective search space used: 413875
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
