Query= MSMg01no449_p07.b1 MSMg01no449_p07.b1 CHROMAT_FILE:
MSMg01no449_p07.b1 PHD_FILE: MSMg01no449_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:43 2005
(521 letters)
>mm_chr14_56806233_56807153
Length = 921
Score = 969 bits (501), Expect = 0.0
Identities = 507/509 (99%)
Strand = Plus / Minus
Query: 5 gaattctgtgtgttacatttgcagtattgattatttttttagtgttggttctgcctatgc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaattctgtgtgttaaatttgcagtattgattatttttttagtgttggttctgcctatgc 450
Query: 65 tggatataatactccaccttgtagcatctcctgtgatttccctttgaagtatcttgaaac 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 449 tggatataatactccaccttgtatcatctcctgtgatttccctttgaagtatcttgaaac 390
Query: 125 ttcacagagaagtaaaccacacgttctgcctcacatgttaaatatattcgataacatagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttcacagagaagtaaaccacacgttctgcctcacatgttaaatatattcgataacatagc 330
Query: 185 acatataaacaaacacgcatgtgaattcagtataatgtattcattacaataatggataat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acatataaacaaacacgcatgtgaattcagtataatgtattcattacaataatggataat 270
Query: 245 aatgtgaagaaagataacaagaaaggttaaaaataagggcctgtggaagcatgtatttgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aatgtgaagaaagataacaagaaaggttaaaaataagggcctgtggaagcatgtatttgc 210
Query: 305 atttcttttttttaactttttaattaattctttgtggctatcacatcacgcacctcagtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atttcttttttttaactttttaattaattctttgtggctatcacatcacgcacctcagtc 150
Query: 365 gccatcatctctctgtccctttttatctgtcctccatccttgcaaccctccccccaaaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gccatcatctctctgtccctttttatctgtcctccatccttgcaaccctccccccaaaag 90
Query: 425 aaaagaaaatagaatggaataaagaaatcttgtcatggaagctgtagtgtgtcatacagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaaagaaaatagaatggaataaagaaatcttgtcatggaagctgtagtgtgtcatacagt 30
Query: 485 ttacccttttgtccacacatctttacttg 513
|||||||||||||||||||||||||||||
Sbjct: 29 ttacccttttgtccacacatctttacttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_p07.g1 MSMg01no449_p07.g1 CHROMAT_FILE:
MSMg01no449_p07.g1 PHD_FILE: MSMg01no449_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:43 2005
(427 letters)
>mm_chr14_56783460_56784286
Length = 827
Score = 774 bits (400), Expect = 0.0
Identities = 421/428 (98%), Gaps = 2/428 (0%)
Strand = Plus / Plus
Query: 1 attaaccttgcttaggtggaaggggtgagcccaggtgactcgcagcccaagtcttgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaaccttgcttaggtggaaggggtgagcccaggtgactcgcagcccaagtcttgctgg 260
Query: 61 aatatgaggtagagaagactccaaaattttggaatttataggtagaggagtgaaagtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatgaggtagagaagactccaaaattttggaatttataggtagaggagtgaaagtctg 320
Query: 121 gtataaatcaggcctgactgaggtagggatggagtagaaactactgttagctagaggtca 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtataaatcaggcctggctgaggtagggatggagtagaaactactgttagctagaggtca 380
Query: 181 gatggaaaacactggaaggccacaaagggggacagaagtcgactgagttctgtcgtgggc 240
||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||
Sbjct: 381 gatggaaaacactggaaggccacaaagggggacagaagttgactaagttgtgtggtgggc 440
Query: 241 tgggaaatgagacccaggtaagtctgggtccatcagctgatgtctatgtatttgagactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggaaatgagacccaggtaagtctgggtccatcagctgatgtctatgtatttgagactg 500
Query: 301 caggtgttgagagtcacatgtcctgctagagaagggg-agttccttcctacaaactggaa 359
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 501 caggtgttgagagtcacatgtcctgctaga-aagggggagttccttcctacaaactggaa 559
Query: 360 agtgactgggttacacagctcatggacttctgaattcccagaatcaaatctcccttcacc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtgactgggttacacagctcatggacttctgaattcccagaatcaaatctcccttcacc 619
Query: 420 tcagtgcc 427
||||||||
Sbjct: 620 tcagtgcc 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
