Query= MSMg01no450_a03.b1 MSMg01no450_a03.b1 CHROMAT_FILE:
MSMg01no450_a03.b1 PHD_FILE: MSMg01no450_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:47 2005
(243 letters)
>mm_chr14_120926030_120926672
Length = 643
Score = 422 bits (218), Expect = e-122
Identities = 236/242 (97%)
Strand = Plus / Minus
Query: 1 atccccttattgctgcttatccaaaggtctcactccaagattgctttgatctttaggata 60
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 442 atccccttattgctgcttatcaaaaggtctcactccaagattgctttgatttttaggata 383
Query: 61 tcctgtgcttcttttcctctgattttaggacatcctgtgcttcttttgttgtgtcctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcctgtgcttcttttcctctgattttaggacatcctgtgcttcttttgttgtgtcctcat 323
Query: 121 cagtttgagggctttaaatgcattgctcttagttctcccagtcttgtcccaatgtgatta 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 322 cagtttgagggccttaaatgcattgctcttagttctcccagtcttgtcccaatgtgaaaa 263
Query: 181 gttctaatggtgaggatgctaccgaatccaaccccacatctgatgacagttgtagcaaca 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gttctaatgatgaggatgctaccgaatccaaccccacatctgatgacagttgtagcaaca 203
Query: 241 ga 242
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_a03.g1 MSMg01no450_a03.g1 CHROMAT_FILE:
MSMg01no450_a03.g1 PHD_FILE: MSMg01no450_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:47 2005
(241 letters)
>mm_chr14_120736760_120737403
Length = 644
Score = 433 bits (224), Expect = e-126
Identities = 238/244 (97%), Gaps = 3/244 (1%)
Strand = Plus / Plus
Query: 1 cagtcgaaccagtgtgttctcactggaatgcgaagccatgaacagacaaacttgacttcc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cagtcgaaccagtgtgttctcactggaatgcgaagccatgaacagagaaacttgacttcc 260
Query: 61 tggagcacttcagacaggtgtattcatttccgtgttctgcaagcaaccatttagtcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggagcacttcagacaggtgtattcatttccgtgttctgcaagcaaccatttagtcccca 320
Query: 121 gcagagctaagagctgaatcgggttcctgaacaaaaagctagggcttctcacagagtttg 180
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gcagagccaagagctgaatcgggttcctgaacaaaaagctggggcttctcacagagtttg 380
Query: 181 cagttgttctggagaaacaatgacagggcagcca---actcaagatcagaacaggttgaa 237
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 cagttgttctggagaaacaatgacagggcagccaccaactcaagatcagaacaggttgaa 440
Query: 238 gtag 241
||||
Sbjct: 441 gtag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 644
Length adjustment: 9
Effective length of query: 232
Effective length of database: 635
Effective search space: 147320
Effective search space used: 147320
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
