Query= MSMg01no451_f04.b1 MSMg01no451_f04.b1 CHROMAT_FILE:
MSMg01no451_f04.b1 PHD_FILE: MSMg01no451_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:31 2005
(675 letters)
>mm_chr14_12678320_12679394
Length = 1075
Score = 1290 bits (667), Expect = 0.0
Identities = 670/671 (99%)
Strand = Plus / Minus
Query: 5 gaattctcagtacactctcatcgcgtggatccccatcccaagcctgcctttctctgcaag 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 875 gaattctcagtacactctcatcgcgtggatccccatcccaagcctgccttcctctgcaag 816
Query: 65 tccacagcctgaatttgtattactgggcagaaatgaggatttaatagtggcacttaggaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tccacagcctgaatttgtattactgggcagaaatgaggatttaatagtggcacttaggaa 756
Query: 125 taagatgatacagctgtgctttaaaaatagtgtttatgggtaatgttacagtggcaaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 taagatgatacagctgtgctttaaaaatagtgtttatgggtaatgttacagtggcaaaca 696
Query: 185 atcagacatgttttcctcttattaagctggggcacacaagatgcttcattggcttgcttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atcagacatgttttcctcttattaagctggggcacacaagatgcttcattggcttgcttg 636
Query: 245 atcgtccatgaacactgtgcacagtttgacttcttccctaatcaaaacttcacttaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 atcgtccatgaacactgtgcacagtttgacttcttccctaatcaaaacttcacttaaaaa 576
Query: 305 aaaaaaagtccattccccttctgatcaatttcccaacagcagaaaaatgtcacaatacag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aaaaaaagtccattccccttctgatcaatttcccaacagcagaaaaatgtcacaatacag 516
Query: 365 ggagctggtgaagcaaacatataatcaattgtttacactcaattaagcagaaaataaaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggagctggtgaagcaaacatataatcaattgtttacactcaattaagcagaaaataaaac 456
Query: 425 ccttctatttggaagattatctataaaacacacgtctgaaaagacaaagcaaatggaagg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccttctatttggaagattatctataaaacacacgtctgaaaagacaaagcaaatggaagg 396
Query: 485 gctagttaatgtaactcacaatggctggagtattaactacctagggagtttacccttagc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gctagttaatgtaactcacaatggctggagtattaactacctagggagtttacccttagc 336
Query: 545 agccgtctgtgtcacatgaccctccaggcaacctgtcagtagttaccttaagttctcctc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 agccgtctgtgtcacatgaccctccaggcaacctgtcagtagttaccttaagttctcctc 276
Query: 605 tccggacttgactttggggatctgaacagcagaaggtgggttgcaggattacaacgtgac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tccggacttgactttggggatctgaacagcagaaggtgggttgcaggattacaacgtgac 216
Query: 665 gtgaaggatta 675
|||||||||||
Sbjct: 215 gtgaaggatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_f04.g1 MSMg01no451_f04.g1 CHROMAT_FILE:
MSMg01no451_f04.g1 PHD_FILE: MSMg01no451_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:32 2005
(357 letters)
>mm_chr14_12504932_12505689
Length = 758
Score = 565 bits (292), Expect = e-165
Identities = 334/358 (93%), Gaps = 19/358 (5%)
Strand = Plus / Plus
Query: 1 agatacagctgctcaagtgtcagagataaatacggatcttggagccagaattccagatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agatacagctgctcaagtgtcagagataaatacggatcttggagccagaatttcagatat 260
Query: 61 gtgtttcccttggtgctcctttgtg-ggcccaggtgcaacagtagcttggagaagccaag 119
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 261 gtgtttcccttggtgctcctttgtgcggcccaggtgcagcagtagcttggagaagccaag 320
Query: 120 tgtttgttttgacacttagggaatcaccacacacacacacacacacacacacacacacac 179
|||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tgtttgttttgacacttagggaatcaccacacacacacacacac---------------c 365
Query: 180 acacacacacacacacacacacacacacacacacatcatacaaaccagtgagagtatgcc 239
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 366 -cacacacacacacacacacacacacacccacac--catacaaaccagtgagagtatgcc 422
Query: 240 tgtctctatatttgaaagtagttaagcagagaaattgtggtgtgccgcttagcttctctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgtctctatatttgaaagtagttaagcagagaaattgtggtgtgccgcttagcttctctt 482
Query: 300 cacacttgaaaccttggggagtgcctgcttgcattctgacagtgttctggctacgtag 357
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 483 cagacttgaaaccttggggagtgtctgcttgcattctgacagtgttctggctacgtag 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
