Query= MSMg01no452_c19.b1 MSMg01no452_c19.b1 CHROMAT_FILE:
MSMg01no452_c19.b1 PHD_FILE: MSMg01no452_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:39 2005
(142 letters)
>mm_chr14_61138402_61138943
Length = 542
Score = 236 bits (122), Expect = 4e-67
Identities = 134/138 (97%)
Strand = Plus / Minus
Query: 5 ggaattctgtgacttgctttgaggcttgaatcaagctaagtggacagacttgagccattt 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggaattctgtgacatggtttgaggcttgaatcaagctaagtggacagacttgagccattt 283
Query: 65 taaccccactttttagagcatgccacaggccgagggcagggcatattttgtatctttgct 124
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 282 taaccccactctttagagcatgccacaggccgagggcagggtatattttgtatctttgct 223
Query: 125 tatgtccacagtgacttc 142
||||||||||||||||||
Sbjct: 222 tatgtccacagtgacttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 542
Length adjustment: 8
Effective length of query: 134
Effective length of database: 534
Effective search space: 71556
Effective search space used: 71556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no452_c19.g1 MSMg01no452_c19.g1 CHROMAT_FILE:
MSMg01no452_c19.g1 PHD_FILE: MSMg01no452_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:40 2005
(595 letters)
>mm_chr14_60966764_60967758
Length = 995
Score = 911 bits (471), Expect = 0.0
Identities = 549/597 (91%), Gaps = 37/597 (6%)
Strand = Plus / Plus
Query: 1 caggacatccagggctacacagcaatatgtatcttgaaaaaagaaaacccaaaccaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 caggacatccagggctacacagcaatatgtatcttgaaaaaagaaaacccaaaccaagag 293
Query: 61 gagagagagagagagag-ggggacacacacacacacacacacacacacacacacacacac 119
||||||||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 294 gagagagagagagagagagaggagagacacacacacacacacacacac------------ 341
Query: 120 acacacagagagagagagagagagagagagagagagagagagagagagagactgagagac 179
||| ||||||||||||||||||||||||||||||||||
Sbjct: 342 ----------------------agacagagagagagagagagagagagagactgagagac 379
Query: 180 tggtcaacttagtgaattccaggacagccagagccatatagcaatatatatcttggaaaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 380 tggtcaacttagtgaattccaggacagccagagccatatagcaatatatatcttgg-aaa 438
Query: 240 aaaaataaacacagagaaagagagagaagagaggagacagagagggggt-gggggagact 298
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 439 aaaaataaacacagagaaagagagagaagagaggagacagagagggggtggggggagact 498
Query: 299 ggccatgtgattgtgggagcctgcaagctcagaatgagtagggcaaaaaggctgtaagtc 358
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 499 gggcatgtgattgtgggagcctgcaagctcagaatgagtagggcaaacaggctgtaaatc 558
Query: 359 ttggccagggtagaggccaagctgaaggttgaaggccaactgtggtgaaagaatccttcc 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctggccagggtagaggccaagctgaaggttgaaggccaactgtggtgaaagaatccttcc 618
Query: 419 attgggctattcttcttcctgaaggcctgtctcatcatcatgaggtttcagatgttggtt 478
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 attgggctattgtgcttcctgaaggcctgtctcatcatcatgaggtttcagatgttggtt 678
Query: 479 tcactcacatcctggcagtgatgtgtatatccatgtgtgcaggtgtgttgagcaaactca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcactcacatcctggcagtgatgtgtatatccatgtgtgcaggtgtgttgagcaaactca 738
Query: 539 ggtgtcatatgtcagaagcaacccagcttgatttatgaggcaagatctttgatgtaa 595
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 739 ggtgtcatatgtcagaagcaacccagcttgatttatgaggcaggatctttgatgtaa 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
