Query= MSMg01no452_f05.b1 MSMg01no452_f05.b1 CHROMAT_FILE:
MSMg01no452_f05.b1 PHD_FILE: MSMg01no452_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:51 2005
(694 letters)
>mm_chr14_60594935_60596028
Length = 1094
Score = 1282 bits (663), Expect = 0.0
Identities = 685/693 (98%), Gaps = 2/693 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagggccttcactacagcgtcttccaaagccatgaattaccaggaccttgaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagggccttcactacagcgtcttccaaagccatgaattaccaggaccttgaac 263
Query: 64 acaggactaagggaaaaaaaccatgttctttctcctcccgcagaagcctggccattccta 123
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 acaggactaaggggaaaaaaccatgttctttctcctcctgcagaagcctggccattccta 323
Query: 124 agtacttagagcaaggcagttttctcttaggaaataacatctatgggggttcaattcaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtacttagagcaaggcagttttctcttaggaaataacatctatgggggttcaattcaga 383
Query: 184 aagtgccggaaacacgtgcttggactggggaggtggctcagggttaaagtattggtgtgt 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 aagtgccggaaacacgtgcttggactggggaggtggctcaggtttaaagtattggtgtgt 443
Query: 244 gtgtgaggccctgggtttaattcctagcttcaaacacacaagaaaatgaagcatacatgt 303
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtgaggccctgggttcaattcctagcttcaaacacacaagaaaatgaagcatacatgt 503
Query: 304 gtaacctgtgtctgaatgtatattttaaaggtagaatgtcactgctccgccagcaagcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaacctgtgtctgaatgtatattttaaaggtagaatgtcactgctccgccagcaagcaa 563
Query: 364 tagtattaatcagggttcattctatgagcagcacatagtgactcaaacccctggctacgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagtattaatcagggttcattctatgagcagcacatagtgactcaaacccctggctacgg 623
Query: 424 ccatactctacctgcccgttctaacatcaccaagaggcagacccagagcaaagagagaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccatactctacctgcccgttctaacatcaccaagaggcagacccagagcaaagagagaga 683
Query: 484 atggccatactgacagaaaatgattctctaggggaaaaaaaaaggttatgcaggaaatag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atggccatactgacagaaaatgattctctaggggaaaaaaaaaggttatgcaggaaatag 743
Query: 544 gcattttgtaaatttgtatggttttctgttctttgattcttatatttccaaatcctgaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcattttgtaaatttgtatggttttctgttctttgattcttatatttccaaatcctgaat 803
Query: 604 taattaagaaatggagagaaaaaaaaa--cccttcattgcttcagagtctacattcagat 661
||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 804 taattaagaaatggagagaaaaaaaaaaacccgtcattgcttcagagtctacattcagat 863
Query: 662 ctttaatgaaaatcatgatatacttgaataaga 694
|||||| ||||||||||||||||||||||||||
Sbjct: 864 ctttaaggaaaatcatgatatacttgaataaga 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_f05.g1 MSMg01no452_f05.g1 CHROMAT_FILE:
MSMg01no452_f05.g1 PHD_FILE: MSMg01no452_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:51 2005
(626 letters)
>mm_chr14_60806802_60807827
Length = 1026
Score = 932 bits (482), Expect = 0.0
Identities = 491/498 (98%), Gaps = 7/498 (1%)
Strand = Plus / Minus
Query: 136 caggcaggcacagtgacacataccgttagtcccagcactcaggaggcataggcaggcatg 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 caggcaggcacagtgacacataccgttagtcccagcactcaggaggcataggcaggcatg 967
Query: 196 tgcatgagttcaaagctaaccttgactacatagttccaggacagccaaggctacatagtg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 tgcatgagttcaaagctaaccttgactacatagttccaggacagccaaggctacatagtg 907
Query: 256 agatcctgaaactgtcttaaaaacaaacaacaggtgaataacaacaaaacaaaacaaaac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 agatcctgaaactgtcttaaaaacaaacaacaggtgaataacaacaaaacaaaacaaaac 847
Query: 316 aa-------aacaacaacaacaacaaaaactcccaaatcctcacaaaatgaatgctatca 368
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aacaacaacaacaacaacaacaacaaaaactcccaaatcctcacaaaatgaatgctatca 787
Query: 369 ccaagaagcatgaaaaagtacataatctttctgagcaaagctatgcaagctttctaaaat 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ccaagaagcatgaaaaagtacataatctttctgagcaaagctatgcaagctttctaaaat 727
Query: 429 aggcacctgcttcctccaactagctacactgagagatgagtcactggctgcatcgccagg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aggcacctgcttcctccaactagctacactgagagatgagtcactggctgcatcgccagg 667
Query: 489 gtgcttgtttgccctcaggggactctgcttaggtggaactctttgtgcttcctttggcct 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gtgcttgtttgccctcaggggactctgcttaggtggaactctttgtgcttcctttggcct 607
Query: 549 tcctgaatgtgtgctttttttcctaatccttatggttgggtcttctccatgatgtgagct 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tcctgaatgtgtgctttttttcctaatccttatggttgggtcttctccatgatgtgagct 547
Query: 609 tttctcctctctctgagg 626
||||||||||||||||||
Sbjct: 546 tttctcctctctctgagg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
