Query= MSMg01no452_k20.b1 MSMg01no452_k20.b1 CHROMAT_FILE:
MSMg01no452_k20.b1 PHD_FILE: MSMg01no452_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:18 2005
(599 letters)
>mm_chr14_22923138_22924136
Length = 999
Score = 1096 bits (567), Expect = 0.0
Identities = 591/599 (98%)
Strand = Plus / Plus
Query: 1 aaactagaccttgggtattgtggtgtggtggtacatgcctgtaattctggcacccaggag 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 aaactagaccttgggtattgtggtatggtggtacatgcctgtaattctggcacccaggag 260
Query: 61 gctgaggcaggagactattgggagtctaaagccagcctgtgatagacagcaagagccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgaggcaggagactattgggagtctaaagccagcctgtgatagacagcaagagccagg 320
Query: 121 cctccagcacctcgtagctctggtctgtattccagggttagctttgagcttactgtgtag 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctccagcaccacgtagctctggtctgtattccagggttagctttgagcttactgtgtag 380
Query: 181 cccccactggcttcaaattcacagcagtccccaacctcagcctgctgggtagtggagttt 240
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cccccactggcttcaaattcacagcagtccccaacctcagcctcctgggtagtggagtta 440
Query: 241 caggcatgcaccacacctgtttgtagctgggatttcagtgatgactgcatcttcttcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggcatgcaccacacctgtttgtagctgggatttcagtgatgactgcatcttcttcagt 500
Query: 301 gcactgagaattctccagaccgtgtaaagactggggctgggaactgtccacacagattct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccactgagaattctccagaccgtgtaaagactggggctgggaactgtccacacagattct 560
Query: 361 cccatcttttatttagttgagaaagaaaggatattttaggccatgggtggcatccagtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccatcttttatttagttgagaaagaaaggatattttaggccatgggtggcatccagtta 620
Query: 421 cagatctgtgagtgtttattgttccctagagatagtcaggaggagcagcctcctgaaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 cagatctgtgagtgtttattgttccctagagatagtcaggaggagcagccttctgaaggg 680
Query: 481 ggctatatgggtgttgaggatcctcatgcaaagtcgggcaggagtggggcttaggctcaa 540
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 ggctatatgggtgtagaggatcctcatgcaaagtcgggcaggagtggggcttgggctcaa 740
Query: 541 gcctgatattttgcagatgatcagaatctgcactaccatggtttgggcccttgatctag 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcctgatattttgcagatgatcagaatctgcactaccatggtttgggcccttgatctag 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_k20.g1 MSMg01no452_k20.g1 CHROMAT_FILE:
MSMg01no452_k20.g1 PHD_FILE: MSMg01no452_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:18 2005
(374 letters)
>mm_chr14_23097010_23097785
Length = 776
Score = 688 bits (356), Expect = 0.0
Identities = 371/376 (98%), Gaps = 2/376 (0%)
Strand = Plus / Minus
Query: 1 cagactaaaatatggatgtctgactagttaatgaaaatgtatttaggattacataagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cagactaaaatatggatgtctgactagttaatgaaaatgtatttaggattacataagaat 654
Query: 61 ggagtacaacttatttgtatgatgttagctaagctgacttgaactttaaatatttagata 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 653 ggagtacaacttatttgtatgatgttagctaagctgacttaaactttaaatatttagata 594
Query: 121 tatggtatgtgggcttctgtgctgactttccaccaaggtaacaacgttcctgagacaaac 180
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 593 tatggtatgtgggcttctgtgctaactttccaccaaggtaacaatgttcctgagacaaac 534
Query: 181 caactaaccatcccacgctcattaatctcttgcagcgcagcacagcggaatcatgtggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caactaaccatcccacgctcattaatctcttgcagcgcagcacagcggaatcatgtggca 474
Query: 241 gaaaaggactgtttatctcatggcacccaggaagcaaagagaaagataagaagaaaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaaaaggactgtttatctcatggcacccaggaagcaaagagaaagataagaagaaaccag 414
Query: 301 agtcccaccagcatcatcgggatatcggtttagtgacttaatttcatcccatttcccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtcccaccagcatcatcgggatatcggtttagtgacttaatttcatcccatttcccaaa 354
Query: 361 -gttgc-cctcttccc 374
||||| |||||||||
Sbjct: 353 ggttgcacctcttccc 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 776
Length adjustment: 9
Effective length of query: 365
Effective length of database: 767
Effective search space: 279955
Effective search space used: 279955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
