Query= MSMg01no454_i21.b1 MSMg01no454_i21.b1 CHROMAT_FILE:
MSMg01no454_i21.b1 PHD_FILE: MSMg01no454_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:47 2005
(435 letters)
>mm_chr14_108860578_108861412
Length = 835
Score = 735 bits (380), Expect = 0.0
Identities = 422/436 (96%), Gaps = 2/436 (0%)
Strand = Plus / Plus
Query: 1 attacataatcattatgaaacatcctgttattaataaaaataaactcacagaaagtaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacataatcattatgaaacatcctgttattaataaaaataaactcacagaaagtaaaa 260
Query: 61 aacaaagaaacaaaaacaacaaaacactcagcgtcattaaaatctaatccacttacatag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 aacaaagaaacaaaaacaacaaaacactcagcatcattaaaatctaatccacttacatag 320
Query: 121 aggaatgggatttttctgctgtaaattagctcagaatcttcctcagaagagaggtgaaat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aggaatgggatttttctgctgtaaattatctcagaatcttcctcagaagagaggtgaaat 380
Query: 181 attcccggtggaatgagataaattcatgtggaaaatagctatcaaacaaacttgaattta 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 attcccggtggaatgagataaattcatgtggaaaatagttatcaaacaaacttgaatttt 440
Query: 241 aaaaaaatctatactagcataggaaaacttggtctaaagcaagaaggttaatgaggcttg 300
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 441 aaaaaaatctatactagcataggaaaacttagtctaaaacaagaaggttaatgaggcttg 500
Query: 301 cttatcaggaaaagctaggaaaatgaagaacccaatagaacaaagcctccaatctatact 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 cttatcaggaaaagctaggaaaatgaagaacccaatagaacaaagcctccagtctatact 560
Query: 361 tataaaaacaacaaaccaggtccatacctctcctgaa-ggaacttaaaacaaaaaacaaa 419
|||||||| | | ||||||||||| ||||||||| || ||||||||||||||||||||||
Sbjct: 561 tataaaaatatcgaaccaggtccacacctctcct-aatggaacttaaaacaaaaaacaaa 619
Query: 420 aaacctgtgcatttgt 435
|||||||||| |||||
Sbjct: 620 aaacctgtgcgtttgt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_i21.g1 MSMg01no454_i21.g1 CHROMAT_FILE:
MSMg01no454_i21.g1 PHD_FILE: MSMg01no454_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:47 2005
(468 letters)
>mm_chr14_109022022_109022889
Length = 868
Score = 845 bits (437), Expect = 0.0
Identities = 461/469 (98%), Gaps = 2/469 (0%)
Strand = Plus / Minus
Query: 1 tacttcatatttcttcaactcagaatttcacagatgatttcaatgactattatatttatg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacttcatattccttcaactcagaatttcacagatgatttcaatgactattatatttatg 442
Query: 61 caagatataagctaagtgtatttctattatttgacatgtttctgtatttcttccctacat 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagatataagccaagtgtatttctattatttgacatgtttctgtatttcttccctacat 382
Query: 121 gcttgctttcatctcactgtaagattcaaagtcagaagcccat-gggactatgcaacatc 179
|||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 381 gcttgcttacatctcactgtaagattcaaagtcagaagcccataggg-ctatgcaacatc 323
Query: 180 atcatattatcttgttattaaatatatgtgcttatcttttctattgtctattatcaattg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcatattatcttgttattaaatatatgtgcttatcttttctattgtctattatcaattg 263
Query: 240 tatttaatatgctgtgtatgtgaaaataggggaaaggtgttttacaatttttcaaattta 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tatttaagatgctgtgtatgtgaaaataggggaaaggtgttttacaatttttcaaattta 203
Query: 300 tactctcatatatatttcatccttactacagtttaccctcctttcttccctcccagtccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tactctcatatatatttcatccttactacagtttaccctcctttcttccctcccagtccc 143
Query: 360 tacccttaccaccacccaactctgtctcctactgtccatctgctcctcctttgtcacttc 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 142 tacccttaccaccacccaactctttctcctactgtccatctgctcctcctttgtcacttc 83
Query: 420 agaaataggcgatcctcctagggacataagtaaacatggctttaatagt 468
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 82 agaaataggcgatcctcctagagacataagtaaacatggctttaatagt 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
