Query= MSMg01no457_f21.b1 MSMg01no457_f21.b1 CHROMAT_FILE:
MSMg01no457_f21.b1 PHD_FILE: MSMg01no457_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:32 2005
(406 letters)
>mm_chr14_30791305_30792110
Length = 806
Score = 727 bits (376), Expect = 0.0
Identities = 397/404 (98%), Gaps = 2/404 (0%)
Strand = Plus / Plus
Query: 4 gaattctctagggttc-acgccggtggcggccattttgactgtgggcagccaggggacgc 62
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctctagggg-cgacgccggtggcggccattttgactgtgggcagccaggggacgc 262
Query: 63 cgcgcctgcgcaatggttctcctctgactgctgtggcgtcggtgtcccagagccccgggg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgcgcctgcgcaatggttctcctctgactgctgtggcgtcggtgtcccagagccccgggg 322
Query: 123 ctggtggtggtccacggtggcagagatgacccaagccgagaagggggacgcggagaacgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctggtggtggtccacggtggcagagatgacccaagccgagaagggggacgcggagaacgg 382
Query: 183 gaaggagaagggcggggagaaggataaggagcagcgcggcgtgaagcggcccatcgtacc 242
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaggagaagggcggggagaaggagaaggagcagcgcggcgtgaagcggcccatcgtacc 442
Query: 243 cgcgttggtccccgagtcgctgcaggaggtgatttgcagggggctggccttggttagacc 302
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 cgcgttggtccccgagtcgctgcaggaggtgaggtgcagggggctggccttggttagacc 502
Query: 303 actgctagcctgtgcctctgctgctggccggagcccagggtccgggcggagccggaagca 362
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgctagcctgggcctctgctgctggccggagcccagggtccgggcggagccggaagca 562
Query: 363 tccgggtcccctcccataggttccttgtgcaaagtagcgcggtg 406
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tccgggtcccctcccataggttccttgtgcaaagtagcgcggtg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_f21.g1 MSMg01no457_f21.g1 CHROMAT_FILE:
MSMg01no457_f21.g1 PHD_FILE: MSMg01no457_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:33 2005
(398 letters)
>mm_chr14_30973382_30974179
Length = 798
Score = 617 bits (319), Expect = 0.0
Identities = 356/375 (94%), Gaps = 13/375 (3%)
Strand = Plus / Minus
Query: 35 cagcctgggctacacagtgaattccaggacagcctgggctacacagagaaactctgactc 94
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 709 cagcctggtctacacagtgaattccaggacagcctgggctacacagagaaaccctgtctc 650
Query: 95 aaaacaaaac-----aaaacaaaaacaaaatttttaaaatctggg------gattttttt 143
|||||||||| ||||||||||||||||||| |||||||||| |||||||
Sbjct: 649 aaaacaaaacaaaataaaacaaaaacaaaattttaaaaatctgggtttttt--ttttttt 592
Query: 144 taaagttaagtgacacaaagaagatttcaaataaaagccaagaaaattgatcaacaaatc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taaagttaagtgacacaaagaagatttcaaataaaagccaagaaaattgatcaacaaatc 532
Query: 204 tacactataagaaatggtaaacgaaactcttcatgctaaaagaaaaataattttaggtag 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tacactataagaaatggtaaacgaaactcttcatgctaaaagaaaaataattttaggtag 472
Query: 264 aaacaaatacatattttagaaataagcaccaaaaaacccccacaaatgtaaagatcgagg 323
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 471 aaacaaatacatattttagaaataagcaccaaaaaaaccccacaaatgtaaagatcgagg 412
Query: 324 tgctccccccacacttctaaatttcttgaaatgatgtcatttaatttaaaaagtagtgtc 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgctccccccacacttctaaatttcttgaaatgatgtcatttaatttaaaaagtagtgtc 352
Query: 384 aagcttccagagaga 398
||||||||| |||||
Sbjct: 351 aagcttccacagaga 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
