Query= MSMg01no457_g20.b1 MSMg01no457_g20.b1 CHROMAT_FILE:
MSMg01no457_g20.b1 PHD_FILE: MSMg01no457_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:37 2005
(471 letters)
>mm_chr14_83948472_83949342
Length = 871
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 148 agatggagagagacaaagaaaaatgagagagagaaatgtagagacagagacacacaaaag 207
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 871 agatggagagagacaaagaaaaatgagagagagaaatatagagacagagacacacaaaag 812
Query: 208 gacagattggacctgcaaagcccatgcccagtggcttaaaaaggcatactaccatatcct 267
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 811 gacagattggacctgcaaagcccatgcccagttgcttaaaaaggcatactaccatatcct 752
Query: 268 tcctaaatagtttcattaactgtggaccaaaaattcaaatatatgagcctagtgaagcca 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tcctaaatagtttcattaactgtggaccaaaaattcaaatatatgagcctagtgaagcca 692
Query: 328 ttatcatttaaaccaccacatttaccatcagatatatttattttaggattatatattcaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttatcatttaaaccaccacatttaccatcagatatatttattttaggattatatattcaa 632
Query: 388 ggtaattataatggatattgattataataaacatgttggttagcaatagtagattagaat 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggtaattataatggatattgattataataaacatgttggttagcaatagtagattagaat 572
Query: 448 tacttaattctaattggggaagaa 471
||||||||||||||||||||||||
Sbjct: 571 tacttaattctaattggggaagaa 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_g20.g1 MSMg01no457_g20.g1 CHROMAT_FILE:
MSMg01no457_g20.g1 PHD_FILE: MSMg01no457_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:37 2005
(405 letters)
>mm_chr14_83830508_83831312
Length = 805
Score = 754 bits (390), Expect = 0.0
Identities = 402/406 (99%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 1 atgaatatagccaaattcaattccatacccagtgaaattaaaacagtaaaattcacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaatatagccaaattcaattccatacccagtgaaattaaaacagtaaaattcacacac 260
Query: 61 agttaatatttctggaagtttgaggtttttccaaaaattgaaaaattacattctgaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttaatatttctggaagtttgaggtttttccaaaaattgaaaaattacattctgaagaa 320
Query: 121 aacaagaaattgtagaaatgggtagttatattgcgatttcaaacctactttgactacact 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 aacaagaaattgtagaaatgggtagttatattacgatttcaaacctactttgactacact 380
Query: 181 caatatactttggtcaccagagtgaatgaatttgaaatagaaataaaattttgcatacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatatactttggtcaccagagtgaatgaatttgaaatagaaataaaattttgcatacat 440
Query: 241 agaaaatctgtaattgcaccaatgcttttgtttgtggatttaaacacttgactaaagttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaatctgtaattgcaccaatgcttttgtttgtggatttaaacacttgactaaagttg 500
Query: 301 ttaataactgaaataccttaattatgaataccttaaatacaaataaatatattaattaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaataactgaaataccttaattatgaataccttaaatacaaataaatatattaattaac 560
Query: 361 aatttactctttaacttttttttgttttggtt-tgctttttattta 405
||||||||||||||| ||||||||||||| || |||||||||||||
Sbjct: 561 aatttactctttaacctttttttgttttg-ttatgctttttattta 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
