Query= MSMg01no457_n03.b1 MSMg01no457_n03.b1 CHROMAT_FILE:
MSMg01no457_n03.b1 PHD_FILE: MSMg01no457_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:10 2005
(448 letters)
>mm_chr14_66458807_66459654
Length = 848
Score = 804 bits (416), Expect = 0.0
Identities = 437/444 (98%)
Strand = Plus / Minus
Query: 5 ggaattctgtcgcattctaaatacagttatcaaagtctatgccacagcagctagaagaca 64
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 846 ggaattctgtcgcagggtaaatacagttatcaaagtctatgctacagcagctagaagaca 787
Query: 65 ggatgttgaatactctaactgcaaaggaataatcaatgtttgaggtgacagatgtgctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 786 ggatgttgaatactctaactgcaaaggaataatcaatgtttgaggtgacagatatgctgt 727
Query: 125 ggatttcaacttgatcaccacacaatgtgtgcacgtatcaaaacactatatttgaaatgt 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 726 ggatttcaacttgatcaccacacaatgtgtgcacgtatcaaaacactgtatttgaaatgt 667
Query: 185 gggcaactgttgtttgtccagtctaattttcaaaaggaattaaataaatcagtaacaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gggcaactgttgtttgtccagtctaattttcaaaaggaattaaataaatcagtaacaaaa 607
Query: 245 cacataaacccaacaacaagggcacaggaacagcacttacctgcctggaatttcaaaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cacataaacccaacaacaagggcacaggaacagcacttacctgcctggaatttcaaaatc 547
Query: 305 aaatgcttttgtaaacttactttcatatttatcctttcccatgtaaatagtgtaagtaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aaatgcttttgtaaacttactttcatatttatcctttcccatgtaaatagtgtaagtaga 487
Query: 365 tgaattaactaaaataaaacaaaaataaaaagaccattagtggggacccattgcatggcc 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 486 tgaattaactaaaataaaacaaaaataaaaagacaattagtggggacccattgcatggcc 427
Query: 425 atgggccatacctggctcacctac 448
||||||||||||||||||||||||
Sbjct: 426 atgggccatacctggctcacctac 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_n03.g1 MSMg01no457_n03.g1 CHROMAT_FILE:
MSMg01no457_n03.g1 PHD_FILE: MSMg01no457_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:11 2005
(284 letters)
>mm_chr14_66304435_66305118
Length = 684
Score = 491 bits (254), Expect = e-143
Identities = 276/284 (97%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 1 tagaaagataatttcaggtaaggtagaatgattttctgttcaaatgctagtgagaatttt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tagaaagataatttcaggtaagttagaatgattttctgttcaaatgctagtgaaaatttt 260
Query: 61 gactctcaaaatttgctaacaattaaggattgagggaaatgatcattgacttttatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactctcaaaatttgctaacaattaaggattgagggaaatgatcattgacttttatttct 320
Query: 121 ttggcagtggagctttgagttgtgcctgatgttttatggcaagattgttgagaccgtctc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ttggcagtggagctttgagttgtgcctgatgttttatggcaagattgttgagaccgtccc 380
Query: 181 gcttggttttttttttttttaaatttttactaggtatcttccttatttacatttccaatg 240
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttggttttttttttttt-aattttttactaggtatcttccttatttacatttccaatg 439
Query: 241 ttatcccaaatgtcccccatacccacccacccccactcccctac 284
|||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 440 ttatcccaaaagtcccccatacccaccc--ccccactcccctac 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
