Query= MSMg01no457_p20.b1 MSMg01no457_p20.b1 CHROMAT_FILE:
MSMg01no457_p20.b1 PHD_FILE: MSMg01no457_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:26 2005
(242 letters)
>mm_chr14_31932936_31933580
Length = 645
Score = 427 bits (221), Expect = e-124
Identities = 238/245 (97%), Gaps = 4/245 (1%)
Strand = Plus / Plus
Query: 1 tttctaaaatattttaaaattcagcttgtgctttggattatagaaggaaaatatacttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tttctaaaatattttaaaattcagcttgtgctttggattatagaaggaaattatacttta 260
Query: 61 agaaaatgttcacaaaaaaaaaaaaaaaa---ggactattacagatcccaatacttggat 117
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 agaaaatgttcacaaaaaaaaaaaaaaaaaaaggactattacagatcccaatacttggat 320
Query: 118 ttggtgaccttgtctttctttcttttcttgagacatggtcctactaccaaccctggctgg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtgaccttgtctttctttcttttcttgagacatggtcctactaccaaccctggctgg 380
Query: 178 tattgtagctcagtgtatagaccaggctagtctcaaactctgcctcttcctcccaagtgc 237
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 -actggagctcagtgtatagaccaggctagtctcaaactctgcctcttcctcccaagtgc 439
Query: 238 tggga 242
|||||
Sbjct: 440 tggga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 645
Length adjustment: 9
Effective length of query: 233
Effective length of database: 636
Effective search space: 148188
Effective search space used: 148188
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_p20.g1 MSMg01no457_p20.g1 CHROMAT_FILE:
MSMg01no457_p20.g1 PHD_FILE: MSMg01no457_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:26 2005
(247 letters)
>mm_chr14_32114083_32114729
Length = 647
Score = 478 bits (247), Expect = e-139
Identities = 247/247 (100%)
Strand = Plus / Minus
Query: 1 caaccatacctggacctctggaccacagcctcagactggctgcggtggtctgagagctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 caaccatacctggacctctggaccacagcctcagactggctgcggtggtctgagagctgg 388
Query: 61 atgaatgatcctctgtcagccattgatgctgagcagctggagaagaatgtcattgagtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgaatgatcctctgtcagccattgatgctgagcagctggagaagaatgtcattgagtcg 328
Query: 121 ttcaagaccatgcacaaatgtgtgaagcagttcaaggacatcccaggtagctgagaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcaagaccatgcacaaatgtgtgaagcagttcaaggacatcccaggtagctgagaatat 268
Query: 181 cccctggtggggcccatgcaagtcatgatgctttttgttggatgggtttgcttcttcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cccctggtggggcccatgcaagtcatgatgctttttgttggatgggtttgcttcttcccc 208
Query: 241 atccaac 247
|||||||
Sbjct: 207 atccaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
