Query= MSMg01no458_m02.b1 MSMg01no458_m02.b1 CHROMAT_FILE:
MSMg01no458_m02.b1 PHD_FILE: MSMg01no458_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:26 2005
(552 letters)
>mm_chr14_25932526_25933477
Length = 952
Score = 808 bits (418), Expect = 0.0
Identities = 436/446 (97%), Gaps = 8/446 (1%)
Strand = Plus / Minus
Query: 110 tccttgcttttaagtagctcatgatctttcaaagaagacagaaggccatcgaatcctgag 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 tccttgcttttaagtagctcatgatctttcaaagaagacagaaggccatcgaatcctgag 893
Query: 170 ctgatgacctgaactcagggctcagtatggcaaacaaaaggccaaggactgagcttaaac 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ctgatgacctgaactcagggctcagtatggcaaacaaaaggccaaggactgagcttaaac 833
Query: 230 cttagcatctccacttccg----ttttttcataatctttgtggatctcagtttctttatc 285
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 832 cttagcatctccacttccggaac----ttcataatctttgtggatctcagtttctttatc 777
Query: 286 tgtaaaatgggaggaagtaggaatacaagtgggcaacgttatgaacattctcttcacaaa 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgtaaaatgggaggaagtaggaatacaagtgggcaacgttatgaacattctcttcacaaa 717
Query: 346 attttagaatccatttgtactttttaaaagtcagtcatgcattggtttgaaattttacta 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 attttagaatccatttgtactttttaaaagtcagtcatgcattggtttgaaattttacta 657
Query: 406 agatacaaattccaaccaagtgggtaccagtatgaacactgctactttcttcacggaaca 465
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 656 agatacaaattccaaccaagtgggcaccagtatgaacactgctactttcttcacggaaca 597
Query: 466 aaagataaaactgagctaattacttttgatatcaaaaggtcaattatttgcaggttccaa 525
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 596 aaagataaaactgagctaattacttttgatatcaaaaggtcaattatttgtaggttccaa 537
Query: 526 atcctcccccctgtggtcatctcttt 551
||||||||||||||||||||||||||
Sbjct: 536 atcctcccccctgtggtcatctcttt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_m02.g1 MSMg01no458_m02.g1 CHROMAT_FILE:
MSMg01no458_m02.g1 PHD_FILE: MSMg01no458_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:26 2005
(248 letters)
>mm_chr14_25732969_25733616
Length = 648
Score = 429 bits (222), Expect = e-125
Identities = 240/246 (97%)
Strand = Plus / Plus
Query: 1 ttctcttactcattattcctagtttggagatttcagttgacaggattcatccctagctag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttctcttactcattattcctagtttggagatttcagttgagaggattcatccctagctag 260
Query: 61 tttgatataagaccaagccccgtgtgtttgggatcagcaacaccctgtctcatgactgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgatataagaccaagccccgtgtgtttgggatcagcaacaccctgtctcatgactgca 320
Query: 121 gccacagaggacaggaaccagtaggatgaactggaggctctgcaggtatttgagcccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccacagaggacaggaaccagtaggatgaactggaggctctgcaggtatttgagcccatg 380
Query: 181 tctaacacaccatcattcagttatggaccccacataagtcagtcggtctttcctcgtctc 240
| ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct: 381 cccaacacaccatcattcagttatggaccccatataagtcagttggtctttcctagtctc 440
Query: 241 tgcttt 246
||||||
Sbjct: 441 tgcttt 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
