Query= MSMg01no458_n22.b1 MSMg01no458_n22.b1 CHROMAT_FILE:
MSMg01no458_n22.b1 PHD_FILE: MSMg01no458_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:35 2005
(468 letters)
>mm_chr14_77373027_77373894
Length = 868
Score = 872 bits (451), Expect = 0.0
Identities = 460/463 (99%)
Strand = Plus / Plus
Query: 6 gaattctcatgatttatacagacactaaataacagatgatcaactaccagcttttatcat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcatgatttatacagacactaaataacagatgatcaactaccagcttttatcat 265
Query: 66 gtattattcctgaccacagagaacagcacttagaagactccattaattctctcaagcctg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtattattcctgaccacagagaacagcacttagaagactccattaattctctcaagcctg 325
Query: 126 ggaaggatgcagtcactgcctcaactgcctgcagccactccatctgtcctctgcccttgt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaaggatgcagtcactgcctcaactgcctgcagccactccatctgtcctctgcccttgt 385
Query: 186 ctgttcttcccagttagcctcaagttttaccaacagtgagacttgcaggaaatcatctca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctgttcttcccagttagcctcaagttttaccaacagtgagacttgcaggaaatcatctca 445
Query: 246 cctgggagcagctgaacctggaagaagcagagagactagttaaccagattacagttgcct 305
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tctgggagtagctgaacctggaagaagcagagagactagttaaccagattacagttgcct 505
Query: 306 aagactgtttgactctgtttatgcctcacactatctccccctttatcttcctcctctaat 365
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aagactgtttgactctgtgtatgcctcacactatctccccctttatcttcctcctctaat 565
Query: 366 cccatggatattcccaaggctaaagatgctccttctccagttcctttctactataaccaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cccatggatattcccaaggctaaagatgctccttctccagttcctttctactataaccaa 625
Query: 426 actgaataaattcctttattatttcacaactcctctctctgat 468
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 actgaataaattcctttattatttcacaactcctctctctgat 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_n22.g1 MSMg01no458_n22.g1 CHROMAT_FILE:
MSMg01no458_n22.g1 PHD_FILE: MSMg01no458_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:35 2005
(451 letters)
>mm_chr14_77550925_77551776
Length = 852
Score = 804 bits (416), Expect = 0.0
Identities = 443/452 (98%), Gaps = 1/452 (0%)
Strand = Plus / Minus
Query: 1 tctgccacaggacctaaattcaaatcccatttcaaccggtgacctgttctgtgaccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tctgccacaggacctaaattcaaatcccatttcaaccggtgacctgttctgtgaccttgg 655
Query: 61 actctt-cccctactgatgctgttgccaagcctacacaagctggctagcatcttcctcat 119
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 654 actcttccccctactgatgctgttgccaagcctacacaagctggctagcgtcttcctcat 595
Query: 120 tggtttgttaagacacttacatgaagcaacatgagatggcttccttggcactgtagaacg 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tggtttgttaagaaacttacatgaagcaacatgagatggcttccttggcactgtagaacg 535
Query: 180 ctggctccacatcaagtgtgtggcagaaacttggaagatagacgtgaatgagaagctcct 239
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 534 ctggctccacatcaagtgtgtggcagaaacttggaagacggacgtgaatgagaagctcct 475
Query: 240 gcagcaagtgtgtcacctttagcaagactgtcactgaacggggttgatggatcccgggcg 299
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 474 gcagcaagtgtggcacctttagcaagactgtcactgaatggggttgatggatcccgggcg 415
Query: 300 tcctgtccaaggatattttaagaacaccaccacaaccaaaagctggcagaaagtgacaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcctgtccaaggatattttaagaacaccaccacaaccaaaagctggcagaaagtgacaca 355
Query: 360 tgcagggatctggagattccatgattctagaggtgctgtcattctgtaaattctgcaact 419
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgcaggaaactggagattccatgattctagaggtgctgtcattctgtaaattctgcaact 295
Query: 420 attgcaaaggtccgagcctttctgttcatatg 451
||||||||||||||||||||||||||||||||
Sbjct: 294 attgcaaaggtccgagcctttctgttcatatg 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|