Query= MSMg01no460_l04.b1 MSMg01no460_l04.b1 CHROMAT_FILE:
MSMg01no460_l04.b1 PHD_FILE: MSMg01no460_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:02 2005
(514 letters)
>mm_chr14_123245648_123246562
Length = 915
Score = 949 bits (491), Expect = 0.0
Identities = 506/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgttcacttctgagccccattttttaatgggtttatttgatttttctggagt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgttcagttctgagccccattttttaatgggtttatttgatttttctggagt 264
Query: 65 ccaccttcttgagttctttatatatattggatattagtcccctatctgatttaggatatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaccttcttgagttctttatatatattggatattagtcccctatctgatttaggatatg 324
Query: 125 ttaagatcctttcccaatctgttggtggcctttatgtcttattgacggtatgacatattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaagatcctttcccaatctgttggtggcctttatgtcttattgacggtatgacatattt 384
Query: 185 atgatagtatcaccagtagggtcttaccatcaagagatgaaaa-cctttaagtatatggt 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 atgatagtatcaccagtagggtcttaccatcaagagatgaaaaacctttaagtatatggt 444
Query: 244 tattctaataatctagatagtaatagtaaagatggtccctagaagaattatgccatttac 303
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tattctaatcatctagatagtaatagtaaagatggtccctagaagaattatgccatttac 504
Query: 304 tgtagaatgagaaattttagcattaaggctctcatgagaattttaacaaaattaataaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtagaatgagaaattttagcattaaggctctcatgagaattttaacaaaattaataaga 564
Query: 364 ggtgaaatgaatggcctttagccatgtggtcatccttcaccccttcacccctgaccattc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtgaaatgaatggcctttagccatgtggtcatccttcaccccttcacccctgaccattc 624
Query: 424 ctcagcccatttctccctgtgcctcactccttctcttccactccccctctctctccctcc 483
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 625 ctcagcccatttctccctgtgcttcactccttctctcccactccccctctctctccctcc 684
Query: 484 caatgtggcaagtcctgtactctaggaagag 514
|||||||||||||||||||||||||||||||
Sbjct: 685 caatgtggcaagtcctgtactctaggaagag 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 915
Length adjustment: 10
Effective length of query: 504
Effective length of database: 905
Effective search space: 456120
Effective search space used: 456120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_l04.g1 MSMg01no460_l04.g1 CHROMAT_FILE:
MSMg01no460_l04.g1 PHD_FILE: MSMg01no460_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:02 2005
(545 letters)
>mm_chr14_123456225_123457169
Length = 945
Score = 781 bits (404), Expect = 0.0
Identities = 434/444 (97%)
Strand = Plus / Minus
Query: 102 atgaatgaattgaccaagaactcaggaatgatgagtctgaagaaaagagtgtagttggat 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 atgaatgaattgaccaagaactcaggaatgatgagtctgaagaaaagagtgtagttggat 885
Query: 162 gaggttgcatatgtctataacatcagcactcagggggcagatacagaagaactacagtag 221
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 884 gaggttgcatatgtctataatatcagcactcagggggcagatacagaaggactacagtag 825
Query: 222 gtttaaaccttcctagtctatatagtaagatccaggccatccaggagcatatggcaaaac 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gtttaaaccttcctagtctatatagtaagatccaggccatccaggagcatatggcaaaac 765
Query: 282 cctgtgtcaaaagaaaatgaagaagggctgagagacaatttggttggtaacatgctttct 341
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 cctgtgtcaaaagaaaataaagaagggctgagagacaatttggttggtaacatgctttct 705
Query: 342 gttctagtaaggagacataaactcagtctccaaggaaggaggagggggaaggctactgtg 401
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gttctagtaaggagacataaattcagtctccaaggaaggaggagggggaaggctactgtg 645
Query: 402 acaatatgcacctgcaatcttaatgctgagagcacaatgacagcaaaagcattgtctgtt 461
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 644 acaatatgcacctgcaatcttaatgctgagggcacagtgacaacaaaagcattgtctgtt 585
Query: 462 gattggtttgtcttgagatctggggagaggtcaatacaggcaggtccccctgtgttcaga 521
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 584 gattggtttgtcttgagatctggggagaggtcaatagaggcaggtccccctgtgttcagt 525
Query: 522 gagcaagcagtgttgcctatttgg 545
|| |||||||||||||||||||||
Sbjct: 524 gaacaagcagtgttgcctatttgg 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
