Query= MSMg01no460_o17.b1 MSMg01no460_o17.b1 CHROMAT_FILE:
MSMg01no460_o17.b1 PHD_FILE: MSMg01no460_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:19 2005
(313 letters)
>mm_chr14_12616640_12617352
Length = 713
Score = 524 bits (271), Expect = e-153
Identities = 306/325 (94%), Gaps = 14/325 (4%)
Strand = Plus / Minus
Query: 1 ataaagccctggggtccatacttagcacccgtaaaagaccaaccaaaattaaaaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ataaagccctggggtccatacttagcacccgtaaaagaccaaccaaaattaaaaaacaaa 567
Query: 61 aaccaaaaagcaagacaaaaaaaa---------taaaaaaattaaaaac---aacccagt 108
|||||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 566 aaccaaaaagcaagacaaaaaaaacaaaaaaacaaaaaaaa--aaaaacaaaaaaccagt 509
Query: 109 attagtagctacagaaaaatctacactgaagtgagtattatgaaagggggacaaactcca 168
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 508 attagtagctacagaaaaatctacactgaagtgagtattattaaagggggacaaactcca 449
Query: 169 taagcaacacgctatacaaaaagcacaaatgtggtgcatgcagaaaagagtatgccagta 228
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 448 taagcaacacgctatacaaaaagcacaaatgtggtgcatgcagaaaagagtacgccagta 389
Query: 229 aatgtccatgagttatcaaataataaccacattgaataaaagtgttagaaacattagaga 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 388 aatgtccatgagttatcaaataataaccacattgaataaaagtgttagaaacattagcga 329
Query: 289 taatgaggttccccagaaaggcaag 313
|||||||||||||||||||||||||
Sbjct: 328 taatgaggttccccagaaaggcaag 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_o17.g1 MSMg01no460_o17.g1 CHROMAT_FILE:
MSMg01no460_o17.g1 PHD_FILE: MSMg01no460_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:19 2005
(447 letters)
>mm_chr14_12429281_12430127
Length = 847
Score = 849 bits (439), Expect = 0.0
Identities = 445/447 (99%)
Strand = Plus / Plus
Query: 1 tcctctgtcttcttgctatgggaacactaggattccagatgtgtgctactgtgaacatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctctgtcttcttgctatgggaacactaggattccagatgtgtgctactgtgaacatta 260
Query: 61 tgtgggttctggggtacccaacccaggtcctcatgcttacatagcaaatgctttagacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgggttctggggtacccaacccaggtcctcatgcttacatagcaaatgctttagacac 320
Query: 121 tgggctctcaacagcttccgtgatactggtttgctgggaaataacttgtagcgtcttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggctctcaacagcttccgtgatactggtttgctgggaaataacttgtagcgtcttagc 380
Query: 181 accttggagttttggatggctgctctgtctcttgtggtagtatctcttaagcaccttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttggagttttggatggctgctctgtctcttgtggtagtatctcttaagcaccttttc 440
Query: 241 ccctccagtttcgatggcttggcagggtgtcccaccctcagactctgcatgcactcttcg 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctccagtttcgaaggcttggcagggtgtcccaccctcagactctgcatgcactcttcc 500
Query: 301 catcagcgattaaagagaaaaagttgcaacagtaacagcaccataaaataacggtgtcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcagcgattaaagagaaaaagttgcaacagtaacagcaccataaaataacggtgtcac 560
Query: 361 ccgactatacctgggctcatccctatacagatttattatcttcctctggaggcttgggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccgactatacctgggctcatccctatacagatttattatcttcctctggaggcttgggtt 620
Query: 421 ccggttttcaataagcaaggagagcct 447
|||||||||||||||||||||||||||
Sbjct: 621 ccggttttcaataagcaaggagagcct 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
