MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-461J17
Chromosome	14 (Build37)
Map Location	31,379,099 - 31,379,379
singlet/doublet	singlet
Overlap gene	Tkt
Upstream gene	Cacna2d3, EG665431, Selk, Actr8, Il17rb, Chdh, Cacna1d, LOC665399, Dcp1a
Downstream gene	Prkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cacna2d3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12294 MGI:1338890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665431 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665431 MGI:3644196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Selk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80795 MGI:1931466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56249 MGI:1860775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il17rb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50905 MGI:1355292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218865 MGI:1860776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cacna1d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12289 MGI:88293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665399 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665399
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Dcp1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75901 MGI:1923151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tkt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21881 MGI:105992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkcd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18753 MGI:97598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665466 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665466 MGI:3646878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Rft1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328370 MGI:3607791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfmbt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54650 MGI:1859609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69179 MGI:1921500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mustn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66175 MGI:1913425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16427 MGI:109536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16426 MGI:96620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16424 MGI:96618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nek4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23955 MGI:1344404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spcs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69019 MGI:1916269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glt8d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76485 MGI:1923735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30877 MGI:1353651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pbrm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66923 MGI:1923998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432834 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432834 MGI:3643518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 558 ESTs, 13 Proteins

name	Nt5dc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70021 MGI:1917271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192187 MGI:2178742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nisch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64652 MGI:1928323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnnc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21924 MGI:98779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sema3g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218877 MGI:3041242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71838 MGI:1919088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104416 MGI:1206586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110084 MGI:107721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 12 Proteins

name	Capn7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12339 MGI:1338030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24056 MGI:1344391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mettl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67011 MGI:1914261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74427 MGI:1921677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Colq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382864 MGI:1338761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacna2d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753235 GeneID:12294 MGI:1338890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, alpha2/delta subunit 3 transcript_id : NM_009785.1

name	Selk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111119000 GeneID:80795 MGI:1931466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein K transcript_id : NM_019979.2

name	Actr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380053 GeneID:56249 MGI:1860775
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARP8 actin-related protein 8 homolog (S. cerevisiae) transcript_id : NM_027493.2

name	Il17rb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368701 GeneID:50905 MGI:1355292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor B transcript_id : NM_019583.3

name	Chdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986562 GeneID:218865 MGI:1860776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : choline dehydrogenase transcript_id : NM_172264.1

name	Chdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348154 GeneID:218865 MGI:1860776
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : choline dehydrogenase transcript_id : NM_175343.3

name	Cacna1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288899 GeneID:12289 MGI:88293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, L type, alpha 1D subunit transcript_id : NM_028981.2

name	Cacna1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288874 GeneID:12289 MGI:88293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, L type, alpha 1D subunit transcript_id : NM_001083616.1

name	Dcp1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778957 GeneID:75901 MGI:1923151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : decapping enzyme transcript_id : NM_133761.3

name	Tkt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385382 GeneID:21881 MGI:105992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transketolase transcript_id : NM_009388.3

name	Prkcd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130235 GeneID:18753 MGI:97598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, delta transcript_id : NM_011103.2

name	EG665466 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396854 GeneID:665466 MGI:3646878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG665466 transcript_id : XM_977131.1

name	Rft1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299620 GeneID:328370 MGI:3607791
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RFT1 homolog (S. cerevisiae) transcript_id : NM_177815.3

name	Sfmbt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9507088 GeneID:54650 MGI:1859609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Scm-like with four mbt domains 1 transcript_id : NM_019460.1

name	Tmem110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802607 GeneID:69179 MGI:1921500
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 110 transcript_id : NM_028839.3

name	Mustn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802278 GeneID:66175 MGI:1913425
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : musculoskeletal, embryonic nuclear protein 1 transcript_id : NM_181390.2

name	Itih4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382967 GeneID:16427 MGI:109536
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter alpha-trypsin inhibitor, heavy chain 4 transcript_id : NM_018746.2

name	Itih3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680495 GeneID:16426 MGI:96620
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha trypsin inhibitor, heavy chain 3 transcript_id : NM_008407.1

name	Itih1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385310 GeneID:16424 MGI:96618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha trypsin inhibitor, heavy chain 1 transcript_id : NM_008406.3

name	Nek4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893154 GeneID:23955 MGI:1344404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 4 transcript_id : NM_011849.2

name	Spcs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386308 GeneID:69019 MGI:1916269
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal peptidase complex subunit 1 homolog (S. cerevisiae) transcript_id : NM_026911.2

name	Glt8d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313215 GeneID:76485 MGI:1923735
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycosyltransferase 8 domain containing 1 transcript_id : NM_029626.1

name	Gnl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363446 GeneID:30877 MGI:1353651
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein-like 3 (nucleolar) transcript_id : NM_178846.2

name	Gnl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802620 GeneID:30877 MGI:1353651
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein-like 3 (nucleolar) transcript_id : NM_153547.3

name	Pbrm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486950 GeneID:66923 MGI:1923998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polybromo 1 transcript_id : NM_001081251.1

name	EG432834 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265389 GeneID:432834 MGI:3643518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 558 ESTs, 13 Proteins product : predicted gene, EG432834 transcript_id : XM_484358.5

name	Nt5dc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625754 GeneID:70021 MGI:1917271
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-nucleotidase domain containing 2 transcript_id : NM_027289.1

name	Stab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20149761 GeneID:192187 MGI:2178742
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stabilin 1 transcript_id : NM_138672.1

name	Nisch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158671 GeneID:64652 MGI:1928323
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nischarin transcript_id : NM_022656.2

name	Tnnc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892226 GeneID:21924 MGI:98779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : troponin C, cardiac/slow skeletal transcript_id : NM_009393.2

name	Sema3g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794604 GeneID:218877 MGI:3041242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G transcript_id : NM_001025379.1

name	Phf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313645 GeneID:71838 MGI:1919088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 7 transcript_id : NM_027949.1

name	Bap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110038 GeneID:104416 MGI:1206586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Brca1 associated protein 1 transcript_id : NM_027088.2

name	Dnahc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396881 GeneID:110084 MGI:107721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 12 Proteins product : dynein, axonemal, heavy chain 1 transcript_id : XM_977593.1

name	Capn7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061447 GeneID:12339 MGI:1338030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 7 transcript_id : NM_009796.2

name	Sh3bp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109150404 GeneID:24056 MGI:1344391
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain binding protein 5 (BTK-associated) transcript_id : NM_011894.2

name	Mettl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129886 GeneID:67011 MGI:1914261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyltransferase like 6 transcript_id : NM_025907.3

name	Eaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362843 GeneID:74427 MGI:1921677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELL associated factor 1 transcript_id : NM_028932.3

name	Colq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114703722 GeneID:382864 MGI:1338761
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase transcript_id : NM_009937.1

name	Cacna2d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753236 GeneID:12294 MGI:1338890
definition	codon_start : 1 note : alpha 2 delta-3; calcium channel, voltage dependent, alpha2/delta subunit 3 product : calcium channel, voltage-dependent, alpha2/delta subunit 3 protein_id : NP_033915.1

name	Selk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111119001 GeneID:80795 MGI:1931466
definition	GO_function : GO:0008430 - selenium binding [Evidence IEA] codon_start : 1 note : heat shock protein, 30 kDa product : selenoprotein K protein_id : NP_064363.2 transl_except : (pos:30786626..30786628,aa:Sec)

name	Actr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13937369 CCDS:CCDS26891.1 GeneID:56249 MGI:1860775
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : actin-related protein 8 homolog product : ARP8 actin-related protein 8 homolog protein_id : NP_081769.1

name	Il17rb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83025064 GeneID:50905 MGI:1355292
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : ecotropic viral integration site 27; IL-17B receptor; interleukin 17B receptor product : interleukin 17 receptor B protein_id : NP_062529.2

name	Chdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986563 CCDS:CCDS26892.1 GeneID:218865 MGI:1860776
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0008812 - choline dehydrogenase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA] GO_process : GO:0006066 - alcohol metabolism [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA]; GO:0019285 - glycine betaine biosynthesis from choline [Evidence IEA] codon_start : 1 exception : mismatches in translation product : choline dehydrogenase protein_id : NP_758468.1

name	Chdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425036 CCDS:CCDS26892.1 GeneID:218865 MGI:1860776
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0008812 - choline dehydrogenase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA] GO_process : GO:0006066 - alcohol metabolism [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA]; GO:0019285 - glycine betaine biosynthesis from choline [Evidence IEA] codon_start : 1 product : choline dehydrogenase protein_id : NP_780552.1

name	Cacna1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288900 GeneID:12289 MGI:88293
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005891 - voltage-gated calcium channel complex [Evidence TAS]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005245 - voltage-gated calcium channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; alpha 1 E; Cav1.3alpha1 product : calcium channel, voltage-dependent, L type, alpha 1D subunit isoform 1 protein_id : NP_083257.2

name	Cacna1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288875 GeneID:12289 MGI:88293
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005891 - voltage-gated calcium channel complex [Evidence TAS]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005245 - voltage-gated calcium channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; alpha 1 E; Cav1.3alpha1 product : calcium channel, voltage-dependent, L type, alpha 1D subunit isoform 2 protein_id : NP_001077085.1

name	Dcp1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778958 GeneID:75901 MGI:1923151
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0000184 - mRNA catabolism, nonsense-mediated decay [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : Smad4-interacting transcriptional co-activator product : MAD homolog 4 interacting transcription coactivator 1 protein_id : NP_598522.3

name	Tkt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678359 CCDS:CCDS26894.1 GeneID:21881 MGI:105992
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004802 - transketolase activity [Evidence IDA] GO_process : GO:0040008 - regulation of growth [Evidence IMP] codon_start : 1 product : transketolase protein_id : NP_033414.1

name	Prkcd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755082 CCDS:CCDS26895.1 GeneID:18753 MGI:97598
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042100 - B cell proliferation [Evidence IMP]; GO:0016064 - immunoglobulin mediated immune response [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase C[d]; protein kinase C, delta IV; protein kinase C, delta V product : protein kinase C, delta protein_id : NP_035233.1

name	EG665466 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396855 GeneID:665466 MGI:3646878
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982225.1

name	Rft1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87299621 CCDS:CCDS26896.1 GeneID:328370 MGI:3607791
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0000280 - nuclear division [Evidence IEA] codon_start : 1 product : RFT1 homolog protein_id : NP_808483.2

name	Sfmbt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507089 CCDS:CCDS26897.1 GeneID:54650 MGI:1859609
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : Scm-related gene containing four mbt domains 1 product : Scm-like with four mbt domains 1 protein_id : NP_062333.1

name	Tmem110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980784 CCDS:CCDS26899.1 GeneID:69179 MGI:1921500
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC69179 protein_id : NP_083115.2

name	Mustn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088922 GeneID:66175 MGI:1913425
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] codon_start : 1 product : musculoskeletal, embryonic nuclear protein 1 protein_id : NP_852055.1

name	Itih4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055252 CCDS:CCDS26901.1 GeneID:16427 MGI:109536
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IDA]; GO:0005540 - hyaluronic acid binding [Evidence IDA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : PK-120 product : inter alpha-trypsin inhibitor, heavy chain 4 protein_id : NP_061216.1

name	Itih3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680496 GeneID:16426 MGI:96620
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : inter-alpha trypsin inhibitor, heavy chain 3 protein_id : NP_032433.1

name	Itih1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249351 GeneID:16424 MGI:96618
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 note : inter-alpha (globulin) inhibitor, H1 polypeptide product : inter-alpha trypsin inhibitor, heavy chain 1 protein_id : NP_032432.2

name	Nek4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754822 CCDS:CCDS26902.1 GeneID:23955 MGI:1344404
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 note : NIMA-related expressed kinase 4 product : NIMA (never in mitosis gene a)-related expressed kinase 4 protein_id : NP_035979.1

name	Spcs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16975492 CCDS:CCDS26903.1 GeneID:69019 MGI:1916269
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA]; GO:0005787 - signal peptidase complex [Evidence ISS] [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0009003 - signal peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence ISS]; GO:0006465 - signal peptide processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : signal peptidase 12kDa protein_id : NP_081187.1

name	Glt8d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313216 CCDS:CCDS26904.1 GeneID:76485 MGI:1923735
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glycosyltransferase 8 domain containing 1 protein_id : NP_083902.1

name	Gnl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281913 GeneID:30877 MGI:1353651
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence ISS] [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0042127 - regulation of cell proliferation [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS] codon_start : 1 note : short isoform is encoded by transcript variant 2; nucleostemin product : guanine nucleotide binding protein-like 3 (nucleolar) short isoform protein_id : NP_849174.1

name	Gnl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30524920 CCDS:CCDS26905.1 GeneID:30877 MGI:1353651
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence ISS] [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0042127 - regulation of cell proliferation [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS] codon_start : 1 note : long isoform is encoded by transcript variant 1; nucleostemin product : guanine nucleotide binding protein-like 3 (nucleolar) long isoform protein_id : NP_705775.2

name	Pbrm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486951 GeneID:66923 MGI:1923998
definition	GO_component : GO:0000776 - kinetochore [Evidence IDA]; GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007507 - heart development [Evidence IMP]; GO:0001890 - placenta development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : 2310032M22Rik product : polybromo 1 protein_id : NP_001074720.1

name	EG432834 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63663484 GeneID:432834 MGI:3643518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_484358.2

name	Nt5dc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625755 GeneID:70021 MGI:1917271
definition	GO_function : GO:0008253 - 5'-nucleotidase activity [Evidence IEA] codon_start : 1 product : 5'-nucleotidase domain containing 2 protein_id : NP_081565.1

name	Stab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149762 CCDS:CCDS26906.1 GeneID:192187 MGI:2178742
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008367 - bacterial binding [Evidence ISS]; GO:0005041 - low-density lipoprotein receptor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence ISS] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0006898 - receptor mediated endocytosis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : stabilin-1 product : stabilin 1 protein_id : NP_619613.1

name	Nisch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158672 GeneID:64652 MGI:1928323
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IDA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IDA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0016601 - Rac protein signal transduction [Evidence IDA] codon_start : 1 note : imidazoline receptor I-1-like protein product : nischarin protein_id : NP_073147.2

name	Tnnc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678369 GeneID:21924 MGI:98779
definition	GO_component : GO:0005861 - troponin complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA] GO_process : GO:0006937 - regulation of muscle contraction [Evidence IEA] codon_start : 1 product : troponin C, cardiac/slow skeletal protein_id : NP_033419.1

name	Sema3g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794605 CCDS:CCDS26908.1 GeneID:218877 MGI:3041242
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : Semaphorin 3G product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G protein_id : NP_001020550.1

name	Phf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313646 CCDS:CCDS26909.1 GeneID:71838 MGI:1919088
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : PHD finger protein 7 protein_id : NP_082225.1

name	Bap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076917 CCDS:CCDS26910.1 GeneID:104416 MGI:1206586
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004221 - ubiquitin thiolesterase activity [Evidence ISS] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0016579 - protein deubiquitination [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : ubiquitin C-terminal hydrolase X4 product : Brca1 associated protein 1 protein_id : NP_081364.1

name	Dnahc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396882 GeneID:110084 MGI:107721
definition	codon_start : 1 note : overriding stop codons product : similar to KIAA1410 protein protein_id : XP_982687.1 transl_except : (pos:complement(32082742..32082744),aa:OTHER)

name	Capn7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753258 CCDS:CCDS26911.1 GeneID:12339 MGI:1338030
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0004198 - calpain activity [Evidence IEA]; GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : calpain 7 protein_id : NP_033926.1

name	Sh3bp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109150405 GeneID:24056 MGI:1344391
definition	GO_component : GO:0005737 - cytoplasm [Evidence IC]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0004860 - protein kinase inhibitor activity [Evidence ISS]; GO:0017124 - SH3 domain binding [Evidence TAS] [Evidence ISS] GO_process : GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0006469 - negative regulation of protein kinase activity [Evidence IDA] codon_start : 1 product : SH3-domain binding protein 5 (BTK-associated) protein_id : NP_036024.2

name	Mettl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385400 CCDS:CCDS26913.1 GeneID:67011 MGI:1914261
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : methyltransferase like 6 protein_id : NP_080183.1

name	Eaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229210 CCDS:CCDS26914.1 GeneID:74427 MGI:1921677
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0008134 - transcription factor binding [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : ELL associated factor 1 protein_id : NP_083208.1

name	Colq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114703723 GeneID:382864 MGI:1338761
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0045202 - synapse [Evidence IEA] GO_process : GO:0042135 - neurotransmitter catabolism [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : AChE Q; acetylcholinesterase-associated collagen product : collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_id : NP_034067.1

name	EG665431 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665431
definition	number : 1 pseudo : _no_value

name	EG665431 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665431
definition	number : 2 pseudo : _no_value

name	EG665431 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665431
definition	number : 3 pseudo : _no_value

name	LOC665399 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665399
definition	number : 1 pseudo : _no_value

name	LOC665399 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665399
definition	number : 2 pseudo : _no_value

clone name	MSMg01-075P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528B16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-089O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262O04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-292C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-461J17.T7 (MSMg01no461_j17.b1)	MSMg01-461J17.TJ (MSMg01no461_j17.g1)
ACC	AG546690	AG546691
length	761	800
length of high quality (start - end)	476 (71 - 546)	281 (74 - 354)
definition	CHROMAT_FILE: MSMg01no461_j17.b1 PHD_FILE: MSMg01no461_j17.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:35:16 2005	CHROMAT_FILE: MSMg01no461_j17.g1 PHD_FILE: MSMg01no461_j17.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:35:16 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAAGATCCGC GGAATTCATTAAATTATCAAAGAAAATCTCAGGTCACAGATCAGGAGAAT TGCTAAAATGGTCATAAAAACACCATCTACAGATTCAATGTACTCAACAT CCAGAGTCCAACGGCACTCTTCACAGAACTTTAAACAAACTTAAAATGCA TACGGAAGCCCAAAAGTCTCAATAAGGCCAAAGCAATCCTAAACAAAACC AGCAATGCTAGAAGCACAACACTTCAAAATATCCTACAGAGTCATTCTAA CAACATGATACTGATGCAAAATCTTACACACAGAGAAATAGAATAAAATC TAAACCATACACCTATGTCCACCTAGTTTAAGAGAGGTGCCAAAAACATG CTTGTTAACAAACAGAGCTGAGGCAAATCCATTTCCACACACAGGAGATC TAAACTACATCCCTCTCAACCCAAACAAAAATCAGCTCAAATGGATCAAA ACTCCTAATGTAACATCTGCAACTCTAAAACTGCTAGAGGAAAAGGTTGG AAAATACTTCAAAATGGAAACCTAGGCAAAGACGTTCTTGATATATGACT CCATTAACCCTGGACATAATAGCCAAAGTTAACCTATGGGAATGGGACCC AATTTTAAAGGTTTCCCCCCCGAAAAAAAAAATGGCTGAAAAAAACCCTT TAGCCTCCCATAAGGGGGAAAAAAATTTTGGTAAAATATTCCTTCCCCCT GGGGGAATTAN	NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXCAAACCAAGTGCTGCAAAGCAGGGAAG CACGCGCCAGCCTGAAGGCTCCTCACCTCAGCATGGCTCCTCAGCCCCAA AGACGAGATACTCTGGATGGAGCTGGTGGCTCTGAGGGGCCACACTGCCT GAGGGGGATTTAAAGGACAGGGTTTGAGGACTTGGGTGAGCATCATGGCT GCCCTTTGTAATGAATCTTGTTGTGACTGTTGGGGGGTACAGCCATCAAG GTATCTTGACCTTATTATTGGAAGAGGTGGGGGTTAGGAATATTCTTTCG GTTGTGTTTATAATGAAATGATTACCACTGGCCTGCTGCGTCTTTTCTAG ATCCTATGCGGCCGCCCCCCTTGACTATAACCCTCTCATGTCCTATTTAA TTTTCACCCATGGATCCTGTCCTTATTATAGCTCTCTGTGTCGTCCCTTT TTTTTCTCCCTTTTTTGCCCTCCCTTCTCTTTTCCTCCTATTGTCCTTCT ACTCTTATCCACCCTTTTCCCTATCCATCTCCTCCTTCACTCCATTTTCA CCCCGCTCTACTTTTTATCCGCCTTTCCTGATCTCGTCTCATTCCTATTT ATTTATGTCCCCTTTTTCTTTCTCTTTTTCCCTCCCTTTTTTCTCTCTAC TTCCTCCGCCCTACCTTTTTCCTCCCTGTCTCATTTTTTTCGCTTTCACC TTTCCACCTTCTCCTTCTTTTTTCCTTTGCTCACGTCTTTTATTCTCTCN
quality values	Open. Hide. 9 9 11 11 11 12 12 22 16 18 23 13 14 10 11 15 17 23 23 27 23 14 18 14 21 27 34 22 15 24 22 21 19 13 10 16 15 15 12 9 9 10 8 8 8 9 11 12 15 30 30 20 19 19 20 30 23 37 26 23 11 10 9 7 7 7 7 8 7 9 12 23 28 37 33 33 33 33 33 37 47 36 38 42 42 42 43 43 53 53 53 53 53 57 57 57 47 47 47 47 47 47 68 68 68 68 68 68 68 68 50 50 50 50 50 53 48 44 37 39 39 44 46 42 44 47 47 48 48 68 68 68 51 51 50 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 43 43 43 43 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 41 41 21 15 11 11 11 12 10 10 10 12 18 24 32 39 46 48 48 53 53 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 59 59 59 59 57 59 59 59 54 54 54 54 57 57 57 54 54 57 57 54 54 54 57 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 48 54 54 59 59 59 59 59 59 59 59 59 59 57 57 54 57 57 57 57 57 57 57 57 57 54 54 54 59 59 43 43 43 47 47 48 43 46 48 54 54 54 57 57 57 48 48 46 48 47 54 48 48 48 57 42 40 30 39 39 43 47 48 59 59 57 57 48 48 48 48 59 59 46 39 39 33 31 30 34 31 38 37 37 39 40 40 40 44 48 48 40 40 40 39 28 17 12 9 10 11 11 11 24 32 30 28 27 23 26 39 43 39 32 32 35 37 28 24 20 25 25 34 33 39 35 19 15 10 10 10 11 19 28 37 35 31 30 39 37 34 30 20 14 21 13 14 15 22 24 32 36 39 20 20 12 12 11 14 10 9 8 8 8 8 10 21 18 21 11 11 13 16 10 10 12 15 15 18 22 19 11 11 11 12 12 24 17 20 12 12 12 12 10 8 8 8 8 9 12 8 9 9 9 10 10 15 12 8 8 8 9 9 9 9 9 9 9 11 11 8 8 8 8 8 8 9 12 12 18 11 9 8 8 8 12 9 13 11 11 10 10 10 11 10 9 8 8 8 8 8 8 8 6 6 8 10 10 9 16 19 12 11 16 12 12 11 11 11 11 11 6 6 6 6 11 8 6 6 7 8 6 11 19 23 28 25 16 16 16 18 10 10 10 8 8 8 8 8 13 28 27 22 20 17 16 12 12 12 6 6 6 8 6 8 8 8 6 8 8 8 8 10 14 17 18 20 24 25 25 25 18 13 13 12 11 9 9 9 9 9 10 13 13 10 13 8 8 8 8 8 10 14 11 15 11 12 8 7 7 9 9 12 11 12 12 12 12 10 3 0	Open. Hide. 0 3 8 8 13 11 11 9 8 8 8 9 6 8 9 10 16 21 37 32 31 32 26 30 29 31 37 29 15 23 9 6 6 6 6 7 6 11 11 13 16 16 34 24 22 23 21 11 11 11 21 21 41 42 34 33 18 10 6 6 6 7 9 14 12 12 22 14 13 13 19 19 23 27 24 22 23 32 28 32 32 33 59 59 59 47 44 44 44 41 41 44 44 44 37 32 32 37 37 37 47 47 59 50 50 41 53 47 50 47 47 59 57 48 48 48 48 48 57 59 57 53 53 50 50 68 68 53 50 50 48 48 54 54 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 42 41 41 41 48 57 68 68 50 50 50 50 50 50 57 59 59 59 59 59 57 68 68 57 57 57 57 57 57 57 57 57 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 59 59 57 57 57 57 57 68 68 59 59 54 57 57 59 57 57 57 57 68 68 68 68 68 68 68 57 57 68 68 68 57 57 57 43 43 43 59 59 68 68 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 54 54 54 54 54 54 59 68 59 59 59 57 59 48 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 59 59 43 48 48 41 41 42 28 23 13 10 8 8 8 9 9 11 11 15 25 41 41 47 48 48 48 48 48 48 48 48 47 43 43 48 48 48 47 47 47 42 39 43 43 42 34 30 20 20 18 20 18 16 12 11 11 16 15 15 17 18 15 24 21 21 22 15 11 11 11 10 10 10 11 8 8 8 8 13 10 11 7 7 10 8 8 8 10 12 13 10 9 8 8 6 6 8 10 16 10 9 9 9 10 10 10 10 10 10 10 10 10 15 23 24 26 22 15 15 12 12 11 10 11 12 12 12 12 15 10 10 10 12 10 8 8 8 10 10 10 9 10 10 10 10 10 10 9 9 9 9 9 11 10 10 11 11 11 14 9 10 8 8 8 8 8 10 10 8 8 6 6 8 8 15 8 8 8 8 6 8 8 12 15 15 10 8 8 8 10 10 10 10 15 12 11 11 12 15 13 16 15 15 13 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 13 10 16 14 18 13 12 12 10 8 8 8 8 8 8 10 10 10 10 10 6 7 8 8 8 9 9 9 12 12 13 8 8 8 8 12 13 15 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 6 10 7 6 8 8 8 8 8 8 7 9 11 16 20 10 10 10 10 8 11 8 8 8 8 8 8 8 8 8 15 12 9 8 8 8 8 8 6 8 8 8 10 12 11 11 8 6 6 8 8 10 11 8 8 8 8 8 10 10 15 10 8 6 6 8 8 9 9 10 8 8 9 8 8 8 8 12 10 10 10 10 15 18 30 28 21 21 8 8 8 8 8 11 21 26 14 14 8 10 8 10 11 12 23 21 16 8 8 6 6 8 8 10 10 8 10 10 11 13 13 10 10 10 8 8 6 6 7 6 6 6 7 8 15 19 19 10 10 9 9 10 8 8 8 8 8 15 15 9 9 10 10 10 11 20 16 13 8 8 8 10 11 16 9 9 10 10 12 12 10 11 8 9 9 8 8 9 10 19 11 15 8 13 10 10 10 14 15 10 8 8 8 10 8 8 8 8 10 8 8 8 8 8 11 11 9 15 12 10 8 8 8 15 14 11 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no461_j17.g1 MSMg01no461_j17.g1 CHROMAT_FILE:
MSMg01no461_j17.g1 PHD_FILE: MSMg01no461_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:16 2005
         (281 letters)



>mm_chr14_31378899_31379579
          Length = 681

 Score =  505 bits (261), Expect = e-147
 Identities = 276/281 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaaccaagtgctgcaaagcagggaagcacgcgccagcctgaaggctcctcacctcagca 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 caaaccaagtgctgcaaagcagggaagcatgcgccagcctgaaggctcctcacctcagca 260

                                                                       
Query: 61  tggctcctcagccccaaagacgagatactctggatggagctggtggctctgaggggccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctcctcagccccaaagacgagatactctggatggagctggtggctctgaggggccac 320

                                                                       
Query: 121 actgcctgagggggatttaaaggacagggtttgaggacttgggtgagcatcatggctgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgcctgagggggatttaaaggacagggtttgaggacttgggtgagcatcatggctgcc 380

                                                                       
Query: 181 ctttgtaatgaatcttgttgtgactgttggggggtacagccatcaaggtatcttgacctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgtaatgaatcttgttgtgactgttggggggtacagccatcaaggtatcttgacctt 440

                                                    
Query: 241 attattggaagaggtgggggttaggaatattctttcggttg 281
           |  |  |||||||||||||||||||||||||||||||||||
Sbjct: 441 acgaagggaagaggtgggggttaggaatattctttcggttg 481


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space:   182784
Effective search space used:   182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information