Query= MSMg01no461_l07.b1 MSMg01no461_l07.b1 CHROMAT_FILE:
MSMg01no461_l07.b1 PHD_FILE: MSMg01no461_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:24 2005
(247 letters)
>mm_chr14_100423494_100424138
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 245/247 (99%), Gaps = 2/247 (0%)
Strand = Plus / Minus
Query: 1 aactcggagcttttatagcactaattcatgtgcttttgcaggcagtcattttaggtaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aactcggagcttttatagcactaattcatgtgcttttgcaggcagtcattttaggtaaga 386
Query: 61 gggaaaaggcattaaaacatcagcccatttccctttcatttgatccgctgccacagttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggaaaaggcattaaaacatcagcccatttccctttcatttgatccgctgccacagttga 326
Query: 121 tttgttgtttttttttctctctcttcattgtggcagaataaaacaccctcacactcctgc 180
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgttgttttttt--ctctctcttcattgtggcagaataaaacaccctcacactcctgc 268
Query: 181 ctattgtgtcctctgaatagaactataatttatattcaataatgaaagtttttaagaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctattgtgtcctctgaatagaactataatttatattcaataatgaaagtttttaagaaca 208
Query: 241 atgtttc 247
|||||||
Sbjct: 207 atgtttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 645
Length adjustment: 9
Effective length of query: 238
Effective length of database: 636
Effective search space: 151368
Effective search space used: 151368
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_l07.g1 MSMg01no461_l07.g1 CHROMAT_FILE:
MSMg01no461_l07.g1 PHD_FILE: MSMg01no461_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:24 2005
(417 letters)
>mm_chr14_100224302_100225118
Length = 817
Score = 783 bits (405), Expect = 0.0
Identities = 414/417 (99%)
Strand = Plus / Plus
Query: 1 aaaacttcctaaataatgtcatcatagatggtctgaaccagaaatttagaagactagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaacttcctaaataatgtcatcatagatggtctgaaccagaaatttagaagactagaat 260
Query: 61 cttactaaagttcttccagcagccagctaatggtgcttaggcaagggacatgtagggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttactaaagttcttccagcagccagctaatggtgcttaggcaagggacatgtagggaca 320
Query: 121 gaacttttttttaaaatgtctatcaaaaaagaatatttctctaaatatgactatctctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacttttttttaaaatgtctatcaaaaaagaatatttctctaaatatgactatctctag 380
Query: 181 ttcttgaagcctatcagtctatggcatcacatagcataaagaattttctagatgtgatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttgaagcctatcagtctatggcatcacatagcataaagaattttctagatgtgatat 440
Query: 241 tatgcttatgtgctacaacacgagatcattcaatagtgtactgataggacccattttgta 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgcttaagtgctacaacacgagatcattcaatagtgtactgataggacccattttgta 500
Query: 301 atatcgtgagtccttttgaacccagaaggaggcagaacagcgatacagaagacggatgaa 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatcgtgagtccttatgaacccagaaggaggcagaacagcgatacagaagacggatgaa 560
Query: 361 acggggagatccaacagaaaagaaagatgtggtgtgaaggaaaatactcctccatca 417
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 acggggagatccaacagaaaagaaagatgtggtgtgaaggaagatactcctccatca 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
