Query= MSMg01no463_a22.b1 MSMg01no463_a22.b1 CHROMAT_FILE:
MSMg01no463_a22.b1 PHD_FILE: MSMg01no463_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:18 2005
(468 letters)
>mm_chr14_31615490_31616357
Length = 868
Score = 855 bits (442), Expect = 0.0
Identities = 460/466 (98%), Gaps = 4/466 (0%)
Strand = Plus / Plus
Query: 5 gaattcttatttctttatctcctagtgatgatcaatggaaaatactgttgtccaaagata 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttatttcttcat-tcctagtgatgatcaatggaaaatactgttgtccaaagata 263
Query: 65 tacttcaaccaccgttgcttctcagggccatatcttaataaaggaagaattgctgagctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacttcaaccaccgttgcttctcagggccatatcttaataaaggaagaattgctgagctg 323
Query: 125 cctcaatgtgtgggacctgggaactgcgttctggtacttagagaggtaagactgtgacct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctcaatgtgtgggacctgggaactgcgttctggtacttagagaggtaagactgtgacct 383
Query: 185 agggcagaacttggaaggtaaactgagtgtcctaggctcattcatgcagagagtgtacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agggcagaacttggaaggtaaactgagtgtcctaggctcattcatgcagagagtgtacca 443
Query: 245 ttgatgtaacaaccataggttcca-tcaaatgtaacttaactgttctaaggtatagttag 303
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 444 ttgatgtaacaaccataggttccaatcaaaa-taacttaactgttctaaggtatagttag 502
Query: 304 ccatggcagatgcgattctaagacttcagatagtgcctagaagtgtgaaaactaccaagc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccatggcagatgcgattctaagacttcagatagtgcctagaagtgtgaaaactaccaagc 562
Query: 364 ctttagattctatgtcttttttgtttcttgtatgtattgtattaatatttttttt-ctta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 563 ctttagattctatgtcttttttgtttcttgtatgtattgtattaatatttttttttctta 622
Query: 423 taacaagatacctgaaggaggttagttaggaacaaaagatttggta 468
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taacaagatacctgaaggaggttagttaggaacaaaagatttggta 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_a22.g1 MSMg01no463_a22.g1 CHROMAT_FILE:
MSMg01no463_a22.g1 PHD_FILE: MSMg01no463_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:18 2005
(378 letters)
>mm_chr14_31809490_31810267
Length = 778
Score = 700 bits (362), Expect = 0.0
Identities = 374/378 (98%)
Strand = Plus / Minus
Query: 1 ctggatttgcttcccaagcactgggattaaaagtgtgcaccattagtggtttggttttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctggatttgcttcccaagcactgggattaaaagtgtgcaccattagtggtttggttttgt 567
Query: 61 tgaatggaagaactttttttaaagctagtaagataatttgtaatatatttataccaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgaatggaagaactttttttaaagctagtaagataatttgtaatatatttataccaataa 507
Query: 121 attagaaactaaagtaaagccttctggtctacttatctactcaggccagatcagtgggcc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 506 attagaaactaaagtaaagccttctggtctacttatccactcaggccagatcagtgggcc 447
Query: 181 tgatatcctcccacaccctacatggtggcccaggaggtctgcagtaaccagggacacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgatatcctcccacaccctacatggtggcccaggaggtctgcagtaaccagggacacagc 387
Query: 241 ctgtctgcctcccattaggtccacagtaactagggacacaggaagttcacagtaaccaga 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctgtctgcctcccaggaggtccacagtaactagggacacaggaagttcacagtaaccaga 327
Query: 301 ggcccaggaggcctgctctaaccagagatgaaggaggtccaccctaaccagaaacagcac 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 326 ggcccaggaggcctgctctaaccagagatgaaggaggcccaccctaaccagaaacagcac 267
Query: 361 tgcctgtctcccaggaga 378
||||||||||||||||||
Sbjct: 266 tgcctgtctcccaggaga 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
