Query= MSMg01no463_c22.b1 MSMg01no463_c22.b1 CHROMAT_FILE:
MSMg01no463_c22.b1 PHD_FILE: MSMg01no463_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:29 2005
(612 letters)
>mm_chr14_47587202_47588212
Length = 1011
Score = 1106 bits (572), Expect = 0.0
Identities = 597/612 (97%), Gaps = 13/612 (2%)
Strand = Plus / Minus
Query: 2 ggaattccctctcctttcttccgagctgtgttgtcatgctgggcagagttcaggacacag 61
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggaattccctctccttccttccgagctgtgttgtcatgctgggcagagttcaggacacag 720
Query: 62 ctttgaatgtggtttcctgattagaagggcgactccaggcaggcaggcaggcagcaggcg 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ctttgaatgtggtttcctgattagaagggcgactccaggcaggcaggcaggca------- 667
Query: 122 ggcaggcgggcaggcgggcaggcgggcaggcgggcaggcgggcaggcgggcaggcgggca 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 -gcaggcgggcaggcgggcaggcgggcaggcgggcaggcgggcaggcgggcaggcgggca 608
Query: 182 ggcaggaactctagcttgaatagtctaatgtcctcatcatccaccacttctttggaatga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggcaggaactctagcttgaatagtctaatgtcctcatcatccaccacttctttggaatga 548
Query: 242 aaacatcaacagaaacgagccagagcaaaagagcatcctt--gtttaaaatcagcagcaa 299
|||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 547 aaacatcaacagaaacgagccagagcaaaagagcatccctggg---aaaatcagcagcaa 491
Query: 300 ggggctgcagcagtaaacatcgctgctggttcttcttcacacagtaaagcgacatgacat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggggctgcagcagtaaacatcgctgctggttcttcttcacacagtaaagcgacatgacat 431
Query: 360 gcgcagttccatcattccgcagcagagttgtgtccttttgtagtgagacaggctctcact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gcgcagttccatcattccgcagcagagttgtgtccttttgtagtgagacaggctctcact 371
Query: 420 ctgtagttttggctggcttggaactcactatagtagaccaggttggcctccaactcatag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctgtagttttggctggcttggaactcactatagtagaccaggttggcctccaactcatag 311
Query: 480 agatctacctccaaacccttgtccaatacagctaatgatgactgagagaggggaacccca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agatctacctccaaacccttgtccaatacagctaatgatgactgagagaggggaacccca 251
Query: 540 caagaagccagacacagcatctgctgcagttcctatcaaagaggagcagggagaagtgga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 caagaagccagacacagcatctgctgcagttcctatcaaagaggagcagggagaagtgga 191
Query: 600 ccccaagaggtg 611
||||||||||||
Sbjct: 190 ccccaagaggtg 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1011
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1001
Effective search space: 602602
Effective search space used: 602602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_c22.g1 MSMg01no463_c22.g1 CHROMAT_FILE:
MSMg01no463_c22.g1 PHD_FILE: MSMg01no463_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:29 2005
(477 letters)
>mm_chr14_47451487_47452363
Length = 877
Score = 922 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 1 tctcaggccaccaatcctgggcgcagggcagggcggagctggtccctccctgttacgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcaggccaccaatcctgggcgcagggcagggcggagctggtccctccctgttacgtag 260
Query: 61 ccagtagtcgggaccagacgagggaggggcgtggcatacctgctatcaaccttgtgattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagtagtcgggaccagacgagggaggggcgtggcatacctgctatcaaccttgtgattg 320
Query: 121 gcattccgtctccagtggccgcggctgtcagctgcccagaagcctgggcgagtgaggacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcattccgtctccagtggccgcggctgtcagctgcccagaagcctgggcgagtgaggacc 380
Query: 181 tacaaagtttgtccgctccggggcgccataccggctcgggtccgggccagccgggctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaaagtttgtccgctccggggcgccataccggctcgggtccgggccagccgggctggg 440
Query: 241 ctgggctgagcccaggagaccccgatggccgcagtgttcctggtaacgctctatgaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggctgagcccaggagaccccgatggccgcagtgttcctggtaacgctctatgaatac 500
Query: 301 tcgccgctcttctacatagcggtggtcttcacctgcttcatcgtcaccaccggcctggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcgccgctcttctacatagcggtggtcttcacctgcttcatcgtcaccaccggcctggta 560
Query: 361 ttaggatggtgagtgtccagggctgggagtggagggcgcggggaccgccggcccggtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaggatggtgagtgtccagggctgggagtggagggcgcggggaccgccggcccggtgtg 620
Query: 421 gggtccgcgcagagggttcgggtgactccgggagagcggtcaccgccaccgaacaca 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggtccgcgcagagggttcgggtgactccgggagagcggtcaccgccaccgaacaca 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
