Query= MSMg01no464_g22.b1 MSMg01no464_g22.b1 CHROMAT_FILE:
MSMg01no464_g22.b1 PHD_FILE: MSMg01no464_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:12 2005
(273 letters)
>mm_chr14_99345547_99346220
Length = 674
Score = 507 bits (262), Expect = e-148
Identities = 271/274 (98%), Gaps = 3/274 (1%)
Strand = Plus / Plus
Query: 1 aattccatttttttttc-ca-cttgatggcacacaataaatatgaggttgtttgcctgct 58
||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccatttttttt-cacaacttgatggcacacaataaatatgaggttgtttgcctgct 259
Query: 59 ttatttaagtccccaatagtatttgtaactaccaaagagataaagccagtgagaaattgt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttatttaagtccccaatagtatttgtaactaccaaagagataaagccagtgagaaattgt 319
Query: 119 gtctgtggccttgatgtttgatcacaaaagggctgagcgacaggaaagactattttgtca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtctgtggccttgatgtttgatcacaaaagggctgagcgacaggaaagactattttgtca 379
Query: 179 gtcacccattacaaatattctacattgtgttaggctttggcggggcccaaactgaccaac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtcacccattacaaatattctacattgtgttaggctttggcggggcccaaactgaccaac 439
Query: 239 atgaaatacttcatctccttggacaacacatccc 272
||||||||||||||||||||||||||||||||||
Sbjct: 440 atgaaatacttcatctccttggacaacacatccc 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_g22.g1 MSMg01no464_g22.g1 CHROMAT_FILE:
MSMg01no464_g22.g1 PHD_FILE: MSMg01no464_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:12 2005
(420 letters)
>mm_chr14_99506524_99507343
Length = 820
Score = 797 bits (412), Expect = 0.0
Identities = 418/420 (99%)
Strand = Plus / Minus
Query: 1 ttaggtggagtgggaactagagagggtgactgattaggaagcagaagagggaccacttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttaggtggagtgggaactagagagggtgactgattaggaagcagaagagggaccacttat 561
Query: 61 gggagggaggcaccagctggaaggaggtcaggaggtcaggaggtcaggaggcaggggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gggagggaggcaccagctggaaggaggtcaggaggtcaggaggtcaggaggcaggggtgg 501
Query: 121 gcacaaagaggaggatgagcaacacatgtcacaatgcacaaaaggtaaggaattacttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcacaaagaggaggatgagcaacacatgtcacaatgcacaaaaggtaaggaattacttca 441
Query: 181 tatgccaacttaaaacacaaacagaaaaaacaaatacacaacgaatgcctctataaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatgccaacttaaaacacaaacagaaaaaacaaatacacaacgaatgcctctataaaaat 381
Query: 241 gccaagccaacttttgtctgattagatgtagccgttttgggtttctttttactgtgtttg 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccaagccaacttcagtctgattagatgtagccgttttgggtttctttttactgtgtttg 321
Query: 301 tttctgacacagggatggcttctaacccactctgtagatcctatctccatgtcctgagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttctgacacagggatggcttctaacccactctgtagatcctatctccatgtcctgagga 261
Query: 361 cagagattacagtatgtgctactaccctgagctttggagttttgtccagatgatgcacga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagagattacagtatgtgctactaccctgagctttggagttttgtccagatgatgcacga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
