Query= MSMg01no465_d11.b1 MSMg01no465_d11.b1 CHROMAT_FILE:
MSMg01no465_d11.b1 PHD_FILE: MSMg01no465_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:14 2005
(639 letters)
>mm_chr14_22981033_22982071
Length = 1039
Score = 1174 bits (607), Expect = 0.0
Identities = 631/639 (98%)
Strand = Plus / Plus
Query: 1 aaagaggccagtttggattagcgaagctcaaattatattttatggaaaattgattttgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaggccagtttggattagcgaagctcaaattatattttatggaaaattgattttgca 260
Query: 61 gcctccaaatttatacggtcgtctgagttagatatcaaagtctacaatgggaaatttgtg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctccaaatttatacggtcgtttgagttagatatcaaagtctacaatgggaaatttgtg 320
Query: 121 gggcacttttaatgcctgggtaaaaatatttggcattgtgtcacgcagtttgacagaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcacttttaatgcctgggtaaaaatatttggcattgtgtcacgcagtttgacagaaat 380
Query: 181 ggttatttccaaagtgattaggacattttgtaattcttataatcttcaactgtctctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttatttccaaagtgattaggacattttgtaattcttataatcttcaactgtctctgtc 440
Query: 241 agtcctttgtattttttataaagaataagacttttcttgacatagcaaaataagtgcctg 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcctttgtatgctggataaagaataagacttttcttgacatagcaaaataagtgcctg 500
Query: 301 ctaaaatcacgaccaatttctagtcttccagatatgaatgaacaggattggcttgcgtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaaaatcacgaccaatttctagtcttccagatatgaatgaacaggattggcttgcgtgg 560
Query: 361 tattttctcgcagcagatttattgtcttaattatgtactgctaaagatcgtacagatggc 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattttctcgcagcagatttactgtcttaattatgtactgctaaagatcgtacagatggc 620
Query: 421 aatcattttctaaaatgcatttatttcttggggtgtccttatattaaatgatatatttct 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 aatcattttctaaaatgcatttatttcttggggtatccttatattaaatgatatatttct 680
Query: 481 tttgatgcaggcgataattttgtgatagaaatcaatttaatggagaccagtccatccctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 tttgatgcaggcgataattttgtgatagaaatcaatttaatggagaccagtccatccttt 740
Query: 541 gcccttacggtttgggtttttaaacagatgatcttgtatctgcaacttcctctttttttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcccttacggtttgggtttttaaacagatgatcttgtatctgcaacttcctctttttttc 800
Query: 601 ctgcactgaaatggtctgcaaagaagtgctaacacatta 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgcactgaaatggtctgcaaagaagtgctaacacatta 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_d11.g1 MSMg01no465_d11.g1 CHROMAT_FILE:
MSMg01no465_d11.g1 PHD_FILE: MSMg01no465_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:14 2005
(571 letters)
>mm_chr14_23164965_23165934
Length = 970
Score = 862 bits (446), Expect = 0.0
Identities = 475/486 (97%), Gaps = 4/486 (0%)
Strand = Plus / Minus
Query: 1 caattcaggcaaatggggggggaggaatatctatttttaatagcagcttaagaaactagc 60
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 488 caattcaggcaaat-gggggggaggaatatctatttttaaaagcagcttaagaaactagc 430
Query: 61 agaagaggaaacagaaaattcaacaggtttgtatttattgaagaaattgagttactagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agaagaggaaacagaaaattcaacaggtttgtatttattgaagaaattgagttactagtt 370
Query: 121 tttaaagctttctctttaggaaattggcagacccaaatgatttcacctctaccaaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tttaaagctttctctttaggaaattggcagacccaaatgatttcacctctaccaaaaatt 310
Query: 181 tggaaagacatacaaaaatttgcacagtgtgcaagagaaaggagagcacttgtgaactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggaaagacatacaaaaatttgcacagtgtgcaagagaaaggagagcacttgtgaactca 250
Query: 241 tctgtttatgagtgacctttctgtctaaatctaaaagagcacgcggaagggacaactctc 300
|||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 249 tctggagatgagtgacctttctgtctaaatctaagagagcacacggaagggacaactctc 190
Query: 301 cattataaacctagacttcaaaaccttgaaacaacagcgaatgagaccataacacgtgta 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 189 cattataaacctagacttcaaaaccttgaaacaacagcgaatgagaccatgacacgtgta 130
Query: 361 aaaggggatgaggcatcatgaccaagttattcatagcctcaaattcaaggtgagtttaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aaaggggatgaggcatcatgaccaagttattcatagcctcaaattcaaggtgagtttaat 70
Query: 421 atttgaaaataaaattatcacattcagcgttttaacag---aaaaaaagaaagaaaaatt 477
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 69 atttgaaaataaaattatcacattcagcgttttaacagaaaaaaaaaagaaagaaaaatt 10
Query: 478 ccacat 483
||||||
Sbjct: 9 ccacat 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
