Query= MSMg01no465_f03.b1 MSMg01no465_f03.b1 CHROMAT_FILE:
MSMg01no465_f03.b1 PHD_FILE: MSMg01no465_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:23 2005
(629 letters)
>mm_chr14_40127301_40128329
Length = 1029
Score = 1185 bits (613), Expect = 0.0
Identities = 622/625 (99%)
Strand = Plus / Plus
Query: 5 gaattccaccctcccttatttggcatccacttgataagtgaataatttctgaaactggga 64
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacccacaattatttggcatccacttgataagtgaataatttctgaaactggga 264
Query: 65 taaaattttgttgttaacagtcacttcaattataagaaattactaatagttaatctttac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaaattttgttgttaacagtcacttcaattataagaaattactaatagttaatctttac 324
Query: 125 aaagaatgttgttgagccaaatcagccattattctctagtggaagttggaccatgtcata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagaatgttgttgagccaaatcagccattattctctagtggaagttggaccatgtcata 384
Query: 185 ccattcttccctgctgcttgggggcattggcaggactaatgaatactcacaaatcagtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccattcttccctgctgcttgggggcattggcaggactaatgaatactcacaaatcagtaa 444
Query: 245 ggttggacaggaatttggatgaacaacataactaatgaaaaatttccaaaaatgtttaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggttggacaggaatttggatgaacaacataactaatgaaaaatttccaaaaatgtttaga 504
Query: 305 tgaacagcacattatactatagcctgtatgtattttgagattaaggaaattgttttgttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaacagcacattatactatagcctgtatgtattttgagattaaggaaattgttttgttg 564
Query: 365 gaaaacaggagtaattgatattttaaaggaaaatatgtgtagcatttctatggagctgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaaaacaggagtaattgatattttaaaggaaaatatgtgtagcatttctatggagctgtg 624
Query: 425 tcttaatcagagtttctattgctgtgataaacaccaaaaccaaaaaagcaagttgaagtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcttaatcagagtttctattgctgtgataaacaccaaaaccaaaaaagcaagttgaagtg 684
Query: 485 aaaagggtttattttgtttgtactttcccatcatggtacctcacagaaagaaatcagggc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaagggtttattttgtttgtactttcccatcatggtacctcacagaaagaaatcagggc 744
Query: 545 agggactcaagacaggaaactcaaagtgtgaaatgatgcagaaacaatggaggggtacta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agggactcaagacaggaaactcaaagtgtgaaatgatgcagaaacaatggaggggtacta 804
Query: 605 ctttctttctttgatttttttcagc 629
|||||||||||||||||||||||||
Sbjct: 805 ctttctttctttgatttttttcagc 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_f03.g1 MSMg01no465_f03.g1 CHROMAT_FILE:
MSMg01no465_f03.g1 PHD_FILE: MSMg01no465_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:23 2005
(506 letters)
>mm_chr14_40229313_40230218
Length = 906
Score = 368 bits (190), Expect = e-106
Identities = 219/230 (95%), Gaps = 4/230 (1%)
Strand = Plus / Minus
Query: 1 ttcccagatggacctggatcaagcatctaggcattccaacatggcacttgagagacat-- 58
||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 425 ttcccagatggacctggatcaagcatctaggcattccaacatgacacttgagag--atgg 368
Query: 59 actggatagctgaggttctaacacatgcatattgacatacagtggtggagttgcccaaaa 118
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 actggatagctgaggttctaacacatggatattgacatacagtggtggagttgcccaaaa 308
Query: 119 gaattgaaacggactttcctgaactctttgtgattagtttacacagttttactgggctca 178
||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 307 gaattgaaatgaactttcctgaactctttgtgattagtttacacagtcttactgggctca 248
Query: 179 aaaatccacactcctttcactagatcagaaatggagatgcatctcctttc 228
|||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaaatccacatttctttcactagatcagaaatggagatgcatctcctttc 198
Score = 139 bits (72), Expect = 3e-37
Identities = 84/88 (95%)
Strand = Plus / Minus
Query: 419 catctcctttcaatggcatgatgagatcattgttgaacctttagtaggctaggaagctgg 478
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 208 catctcctttcaatggcacaatgagatcattgctgaacctttagtaggctaggaagctgg 149
Query: 479 tctgtttgagtgctcactgtgatgtgac 506
||||||||||| ||||||||||||||||
Sbjct: 148 tctgtttgagtcctcactgtgatgtgac 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
